RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 FARS2O95363 451 aaKnown RBP12.11□□□□□ -0.47
SNHG1-213ENST00000540725 PGA4P0DJD7 388 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 PGA3P0DJD8 388 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 SAGP10523 405 aaPredicted RBP12.11□□□□□ -0.47
SNHG1-213ENST00000540725 NAT2P11245 290 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 ITGA2P17301 1181 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 CD247P20963 164 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 RGS7BPQ6MZT1 257 aaPredicted RBP12.11□□□□□ -0.47
SNHG1-213ENST00000540725 PATL1Q86TB9 770 aaKnown RBP12.11□□□□□ -0.47
SNHG1-213ENST00000540725 SLC30A8Q8IWU4 369 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 SLC30A7Q8NEW0 376 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 YIPF5Q969M3 257 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 MPP4Q96JB8 637 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 ATP6V1G3Q96LB4 118 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 SH3GL3Q99963 347 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 RACGAP1Q9H0H5 632 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 ZNF385DQ9H6B1 395 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 ZNF275Q9NSD4 429 aaPredicted RBP12.11□□□□□ -0.47
SNHG1-213ENST00000540725 ZNF229Q9UJW7 825 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 DYSFO75923 2080 aa12.11□□□□□ -0.47
SNHG1-213ENST00000540725 TFP02787 698 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 HIST1H2ABP04908 130 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 ASAH2BP0C7U1 165 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 FAM157BP0CG42 384 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 UMPSP11172 480 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 PCGF2P35227 344 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 TMEM33P57088 247 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 MRPS11P82912 194 aaKnown RBP12.1□□□□□ -0.47
SNHG1-213ENST00000540725 NKPD1Q17RQ9 610 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 ALKBH6Q3KRA9 238 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 TTMPQ5BVD1 217 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 TMEM53Q6P2H8 277 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 HIST3H2AQ7L7L0 130 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 NANOGNBQ7Z5D8 188 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 PAQR4Q8N4S7 273 aaPredicted RBP12.1□□□□□ -0.47
SNHG1-213ENST00000540725 OR4K5Q8NGD3 323 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 STON2Q8WXE9 905 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 HIST1H2ACQ93077 130 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 TAMM41Q96BW9 452 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 THOC1Q96FV9 657 aaKnown RBP12.1□□□□□ -0.47
SNHG1-213ENST00000540725 ZNF426Q9BUY5 554 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 SLC19A3Q9BZV2 496 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 PCDHAC1Q9H158 963 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 KAT8Q9H7Z6 458 aaKnown RBP12.1□□□□□ -0.47
SNHG1-213ENST00000540725 RNF121Q9H920 327 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 CDH20Q9HBT6 801 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 LPAR2Q9HBW0 351 aa12.1□□□□□ -0.47
SNHG1-213ENST00000540725 SLC22A23A1A5C7 686 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 FAM157AC9JC47 383 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 WNT9BO14905 357 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 PPIHO43447 177 aaKnown RBP12.09□□□□□ -0.47
SNHG1-213ENST00000540725 RP2O75695 350 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 BCL10O95999 233 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 CLPTM1O96005 669 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 IGHG1P01857 330 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 QDPRP09417 244 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 CCL2P13500 99 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 KLF3P57682 345 aaPredicted RBP12.09□□□□□ -0.47
SNHG1-213ENST00000540725 SELENOVP59797 346 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 NFYCQ13952 458 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 INTS11Q5TA45 600 aaKnown RBP12.09□□□□□ -0.47
SNHG1-213ENST00000540725 SLC16A14Q7RTX9 510 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 DPPA2Q7Z7J5 298 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 OR10A6Q8NH74 314 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 SLC26A7Q8TE54 656 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 TMEM186Q96B77 213 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 ZNF416Q9BWM5 594 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 OR51B6Q9H340 312 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 C1orf198Q9H425 327 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 MEPEQ9NQ76 525 aaPredicted RBP12.09□□□□□ -0.47
SNHG1-213ENST00000540725 HIF1ANQ9NWT6 349 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 TREM2Q9NZC2 230 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 TAAR3PQ9P1P4 343 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 GPR160Q9UJ42 338 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 METRNQ9UJH8 293 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 ARHGAP32A7KAX9 2087 aa12.09□□□□□ -0.47
SNHG1-213ENST00000540725 IGLV3-9A0A075B6K5 115 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 C17orf100A8MU93 164 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 BLOC1S5-TXNDC5H3BN57 136 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 MSMBP08118 114 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 GAAP10253 952 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 ZNF250P15622 560 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 MAGEB1P43366 347 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 CRYBA2P53672 197 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 CLRN1P58418 232 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 ERVS71-1P61550 626 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 MYBPC1Q00872 1141 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 RUNX1T1Q06455 604 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 SLC36A2Q495M3 483 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 TMEM154Q6P9G4 183 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 NOXO1Q8NFA2 376 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 SYNPRQ8TBG9 265 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 TSPEARQ8WU66 669 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 SNX33Q8WV41 574 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 MCHR2Q969V1 340 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 TSPAN32Q96QS1 320 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 ZNF347Q96SE7 839 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 PRSS27Q9BQR3 290 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 OCEL1Q9H607 264 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 METTL17Q9H7H0 456 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms