RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	FAM220BP	B1ANY3	271 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	MRAS	O14807	208 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	SYNGR3	O43761	229 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	LMX1B	O60663	402 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	LILRA1	O75019	489 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	OR7A10	O76100	309 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	BCL10	O95999	233 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	IFNA14	P01570	189 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	QDPR	P09417	244 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	FUT1	P19526	365 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	KDELR2	P33947	212 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	PTDSS1	P48651	473 aa	Known RBP	11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	UGT2B15	P54855	530 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	SELENOW	P63302	87 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	RPL18	Q07020	188 aa	Known RBP	11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	PIN1	Q13526	163 aa	Predicted RBP	11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	C10orf128	Q5T292	105 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	ARMC4	Q5T2S8	1044 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	UBASH3B	Q8TF42	649 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	TMEM239	Q8WW34	195 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	ASB10	Q8WXI3	467 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	HPS1	Q92902	700 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	MCHR2	Q969V1	340 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	NMD3	Q96D46	503 aa	Known RBP	11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	BPESC1	Q9GZL8	116 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	MS4A5	Q9H3V2	200 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	FGFR1OP2	Q9NVK5	253 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	ZNF446	Q9NWS9	450 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	GID8	Q9NWU2	228 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	SLC7A8	Q9UHI5	535 aa		11.28	□□□□□ -0.6
SEMA4D-223	ENST00000540475	KPNA4	O00629	521 aa	Predicted RBP	11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	SERPINI2	O75830	405 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	SNAP29	O95721	258 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	RAB36	O95755	333 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	IGHG1	P01857	330 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	ERCC1	P07992	297 aa	Predicted RBP	11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	ADRA2A	P08913	450 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	PATE4	P0C8F1	98 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	ACADS	P16219	412 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	ZNF16	P17020	682 aa	Predicted RBP	11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	TAS2R41	P59536	307 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	RUNX1T1	Q06455	604 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	GGTLC2	Q14390	218 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	MELK	Q14680	651 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	RAB39A	Q14964	217 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	MMEL1	Q495T6	779 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	CYBRD1	Q53TN4	286 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	FAM166A	Q6J272	317 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	NANOGNB	Q7Z5D8	188 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	PFN4	Q8NHR9	129 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	TMEM255B	Q8WV15	326 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	BEX2	Q9BXY8	128 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	C1orf198	Q9H425	327 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	SMURF2	Q9HAU4	748 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	C20orf141	Q9NUB4	165 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	A4GNT	Q9UNA3	340 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	HIF3A	Q9Y2N7	669 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	AP3M1	Q9Y2T2	418 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	FBN3	Q75N90	2809 aa		11.27	□□□□□ -0.61
SEMA4D-223	ENST00000540475	STAB1	Q9NY15	2570 aa		11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	LOC100653049	A0A140TA62	436 aa		11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	SLC22A23	A1A5C7	686 aa		11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	BLOC1S5-TXNDC5	H3BN57	136 aa		11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	TRMU	O75648	421 aa	Known RBP	11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	KRT34	O76011	436 aa		11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	FARS2	O95363	451 aa	Known RBP	11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	MMP7	P09237	267 aa	Predicted RBP	11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	APEH	P13798	732 aa	Known RBP	11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	ZNF250	P15622	560 aa		11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	TNFRSF1B	P20333	461 aa		11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	IGFBP5	P24593	272 aa		11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	OR1E2	P47887	323 aa		11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	DAP3	P51398	398 aa	Known RBP	11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	RPS23	P62266	143 aa	Known RBP	11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	MRPS11	P82912	194 aa	Known RBP	11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	ELFN2	Q5R3F8	820 aa		11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	C8orf82	Q6P1X6	216 aa	Predicted RBP	11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	HDDC2	Q7Z4H3	204 aa		11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	SGTB	Q96EQ0	304 aa		11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	ZNF347	Q96SE7	839 aa		11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	SH3GL3	Q99963	347 aa		11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	SOX7	Q9BT81	388 aa		11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	STX18	Q9P2W9	335 aa	Known RBP	11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	REV1	Q9UBZ9	1251 aa		11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	UGT2A1	Q9Y4X1	527 aa		11.26	□□□□□ -0.61
SEMA4D-223	ENST00000540475	IGLV3-9	A0A075B6K5	115 aa		11.25	□□□□□ -0.61
SEMA4D-223	ENST00000540475	LOC100289279	A0A1B0GTE1	492 aa		11.25	□□□□□ -0.61
SEMA4D-223	ENST00000540475		A0A1W2PRG6	482 aa		11.25	□□□□□ -0.61
SEMA4D-223	ENST00000540475	ELOVL7	A1L3X0	281 aa		11.25	□□□□□ -0.61
SEMA4D-223	ENST00000540475	SH3PXD2B	A1X283	911 aa		11.25	□□□□□ -0.61
SEMA4D-223	ENST00000540475		M0R233	179 aa		11.25	□□□□□ -0.61
SEMA4D-223	ENST00000540475	PTH	P01270	115 aa		11.25	□□□□□ -0.61
SEMA4D-223	ENST00000540475	IGHM	P01871	453 aa		11.25	□□□□□ -0.61
SEMA4D-223	ENST00000540475	F13B	P05160	661 aa		11.25	□□□□□ -0.61
SEMA4D-223	ENST00000540475	UMPS	P11172	480 aa		11.25	□□□□□ -0.61
SEMA4D-223	ENST00000540475	AQP2	P41181	271 aa		11.25	□□□□□ -0.61
SEMA4D-223	ENST00000540475	CHN2	P52757	468 aa		11.25	□□□□□ -0.61
SEMA4D-223	ENST00000540475	MRPS34	P82930	218 aa	Known RBP	11.25	□□□□□ -0.61
SEMA4D-223	ENST00000540475	GALK2	Q01415	458 aa		11.25	□□□□□ -0.61
SEMA4D-223	ENST00000540475	ST3GAL3	Q11203	375 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms