RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 ARHGDIGQ99819 225 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 CCDC28BQ9BUN5 200 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 PLA2G12AQ9BZM1 189 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 BCL2L14Q9BZR8 327 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 SLC19A3Q9BZV2 496 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 IKZF5Q9H5V7 419 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 LPAR2Q9HBW0 351 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 SLCO1B3Q9NPD5 702 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 TMEM38BQ9NVV0 291 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 SLCO1C1Q9NYB5 712 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 TAS2R5Q9NYW4 299 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 CCDC167Q9P0B6 97 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 TAAR3PQ9P1P4 343 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 PCDHB10Q9UN67 800 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 ANGPT4Q9Y264 503 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 TMEM89A2RUT3 159 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 C11orf98E9PRG8 122 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 DHHO43323 396 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 VIMP08670 466 aaKnown RBP10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 PATE4P0C8F1 98 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 PGA4P0DJD7 388 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 PGA3P0DJD8 388 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 AQP1P29972 269 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 CRYBB2P43320 205 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 RAD52P43351 418 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 MAGEB1P43366 347 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 ATP4BP51164 291 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 ARFIP2P53365 341 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 KLF3P57682 345 aaPredicted RBP10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 PCBP3P57721 371 aaKnown RBP10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 TEKQ02763 1124 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 RBBP4Q09028 425 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 MOGQ16653 247 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 SLC36A2Q495M3 483 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 ACSM5Q6NUN0 579 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 TMEM53Q6P2H8 277 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 FAHD2BQ6P2I3 314 aaPredicted RBP10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 TMEM154Q6P9G4 183 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 TTC33Q6PID6 262 aaPredicted RBP10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 LRFN4Q6PJG9 635 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 OR1J2Q8NGS2 313 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 SYNPRQ8TBG9 265 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 C11orf40Q8WZ69 217 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 TLCD1Q96CP7 247 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 RAB39BQ96DA2 213 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 FAHD2AQ96GK7 314 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 RBM4Q9BWF3 364 aaKnown RBP10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 CDH20Q9HBT6 801 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 HINT3Q9NQE9 182 aaKnown RBP10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 G6PC2Q9NQR9 355 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 NANSQ9NR45 359 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 ZNF229Q9UJW7 825 aa10.26□□□□□ -0.77
CBX3P4-202ENST00000540428 CENPBD1B2RD01 187 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 TRIM77I1YAP6 450 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 M0R3H8 397 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 RNF13O43567 381 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 SPRY1O43609 319 aaPredicted RBP10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 ERLIN1O75477 346 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 CH25HO95992 272 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 CLPTM1O96005 669 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 IGHG1P01857 330 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 MT-ND5P03915 603 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 ASAH2BP0C7U1 165 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 FAM157BP0CG42 384 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 EPHA1P21709 976 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 LIMS1P48059 325 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 IDH3AP50213 366 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 ACTG1P63261 375 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 DUSP7Q16829 419 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 TBC1D28Q2M2D7 210 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 RUNDC3AQ59EK9 446 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 ENTPD8Q5MY95 495 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 SMYD1Q8NB12 490 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 C11orf65Q8NCR3 313 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 OR4K5Q8NGD3 323 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 OR6T1Q8NGN1 323 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 SGMS2Q8NHU3 365 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 ADAMTS16Q8TE57 1224 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 MPP4Q96JB8 637 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 SH3GL3Q99963 347 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 CPPED1Q9BRF8 314 aaPredicted RBP10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 ZNF426Q9BUY5 554 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 LRMDAQ9H2I8 198 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 ZNF665Q9H7R5 613 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 RNF121Q9H920 327 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 TRIM33Q9UPN9 1127 aa10.25□□□□□ -0.77
CBX3P4-202ENST00000540428 IGHV1-69-2A0A0G2JMI3 117 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 A0A0G2JMP0 313 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 A0A0X1KG70 313 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 IQCMA0A1B0GVH7 501 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 TRAPPC13A5PLN9 417 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 J3QLI3 93 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 M0QX08 132 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 DEAF1O75398 565 aaPredicted RBP10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 LYPD3O95274 346 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 BCL10O95999 233 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 THY1P04216 161 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 HIST1H2ABP04908 130 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 LCKP06239 509 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms