RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 ARPC3O15145 178 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 SLC43A1O75387 559 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 TNFSF13O75888 250 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 PPP1R3DO95685 299 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 SDHAP31040 664 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 ACVR1BP36896 505 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 NPRL3Q12980 569 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 SLC27A4Q6P1M0 643 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 OR8D4Q8NGM9 314 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 ASB5Q8WWX0 329 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 APH1AQ96BI3 265 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 STARD4Q96DR4 205 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 TSPAN32Q96QS1 320 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 RIBC2Q9H4K1 309 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 C12orf49Q9H741 205 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 RNF6Q9Y252 685 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 ADAM18Q9Y3Q7 739 aa13.68□□□□□ -0.22
DDB1-216ENST00000539739 A6NIZ1 184 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 XKRYO14609 159 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 BMP5P22003 454 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 CHRNB4P30926 498 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 GIPRP48546 466 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 SELENOPP49908 381 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 RAP1BP61224 184 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 RAP1AP62834 184 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 MYBPC1Q00872 1141 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 ARMC4Q5T2S8 1044 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 SLX4IPQ5VYV7 408 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 VWA1Q6PCB0 445 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 VASH1Q7L8A9 365 aaPredicted RBP13.67□□□□□ -0.22
DDB1-216ENST00000539739 FAM122BQ7Z309 247 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 CCDC71Q8IV32 467 aaPredicted RBP13.67□□□□□ -0.22
DDB1-216ENST00000539739 ARIH2OSQ8N7S6 290 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 ASB10Q8WXI3 467 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 ZNF566Q969W8 418 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 SLC25A44Q96H78 314 aaPredicted RBP13.67□□□□□ -0.22
DDB1-216ENST00000539739 Q96M85 177 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 RDH12Q96NR8 316 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 GABARAPL3Q9BY60 117 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 PIGMQ9H3S5 423 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 PLSCR4Q9NRQ2 329 aa13.67□□□□□ -0.22
DDB1-216ENST00000539739 J3QKU1 62 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 BHLHE40O14503 412 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 ZNF432O94892 652 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 TXNDC12O95881 172 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 IGHG1P01857 330 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 CD8BP10966 210 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 PLA2G2AP14555 144 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 NTF4P34130 210 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 OR3A2P47893 321 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 ADORA2A-AS1P86434 159 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 CAMK2DQ13557 499 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 GINS1Q14691 196 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 PTGES3Q15185 160 aaKnown RBP13.66□□□□□ -0.22
DDB1-216ENST00000539739 PGGHGQ32M88 737 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 BTLAQ7Z6A9 289 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 CENPSQ8N2Z9 138 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 LNX2Q8N448 690 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 POMGNT2Q8NAT1 580 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 OR2M2Q96R28 347 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 DHRS9Q9BPW9 319 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 SMPD3Q9NY59 655 aaPredicted RBP13.66□□□□□ -0.22
DDB1-216ENST00000539739 UPB1Q9UBR1 384 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 CEPT1Q9Y6K0 416 aa13.66□□□□□ -0.22
DDB1-216ENST00000539739 HIVEP3Q5T1R4 2406 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 PCNX1Q96RV3 2341 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 TEX13CA0A0J9YWL9 993 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 PYCARD-AS1I3L0S3 204 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 ARHGEF9O43307 516 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 KRT33AO76009 404 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 CRYZL1O95825 349 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 HMGN1P05114 100 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 NR2C1P13056 603 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 CTRB1P17538 263 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 CLRN1P58418 232 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 CDK5Q00535 292 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 KRR1Q13601 381 aaKnown RBP13.65□□□□□ -0.22
DDB1-216ENST00000539739 ZIK1Q3SY52 487 aaPredicted RBP13.65□□□□□ -0.22
DDB1-216ENST00000539739 CARD17Q5XLA6 110 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 CTRB2Q6GPI1 263 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 JAZF1Q86VZ6 243 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 UBE2J2Q8N2K1 259 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 GPR137CQ8N3F9 429 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 IQCF1Q8N6M8 205 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 OR6N1Q8NGY5 312 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 ZNF519Q8TB69 540 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 LRR1Q96L50 414 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 PRRG3Q9BZD7 231 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 SLCO5A1Q9H2Y9 848 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 TOR3AQ9H497 397 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 SLC25A19Q9HC21 320 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 B3GAT2Q9NPZ5 323 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 ALPK2Q86TB3 2170 aa13.65□□□□□ -0.22
DDB1-216ENST00000539739 INTS1Q8N201 2190 aaKnown RBP13.65□□□□□ -0.22
DDB1-216ENST00000539739 DIDO1Q9BTC0 2240 aaKnown RBP13.65□□□□□ -0.22
DDB1-216ENST00000539739 MSTNO14793 375 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 CNOT4O95628 575 aaKnown RBP13.64□□□□□ -0.23
DDB1-216ENST00000539739 SNAP29O95721 258 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 CGAP01215 116 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 IFNGP01579 166 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms