RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 IGLV3-21P80748 117 aaPredicted RBP11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 DYRK1AQ13627 763 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 TRAM1Q15629 374 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 ZNF660Q6AZW8 331 aaPredicted RBP11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 CBLN3Q6UW01 205 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 ZNF615Q8N8J6 731 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 BVESQ8NE79 360 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 OR4C16Q8NGL9 310 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 OR2T27Q8NH04 317 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 OR14A16Q8NHC5 309 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 LRRC61Q9BV99 259 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 TMEM185BQ9H7F4 350 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 TCF7L1Q9HCS4 588 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 EXOSC3Q9NQT5 275 aaKnown RBP11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 GPR27Q9NS67 375 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 TAS2R3Q9NYW6 316 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 KLHDC2Q9Y2U9 406 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 V9GY05 133 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 TRAV8-7A0A075B6U6 113 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 TRAV1-2A0A0B4J238 106 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 SERINC4A6NH21 518 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 C17orf51A8MQB3 221 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 IFNGP01579 166 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 F13BP05160 661 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 GTF2F2P13984 249 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 GABRA1P14867 456 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 IFNGR1P15260 489 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 CDKN2AP42771 156 aaKnown RBP11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 DIO1P49895 249 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 PON3Q15166 354 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 PWWP2BQ6NUJ5 590 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 PDZD9Q8IXQ8 264 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 MRPS24Q96EL2 167 aaKnown RBP11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 NMNAT2Q9BZQ4 307 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 WDR13Q9H1Z4 485 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 OR10A5Q9H207 317 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 MMP17Q9ULZ9 603 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 NPTNQ9Y639 398 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 TRAV18A0A075B6X5 111 aa11.4□□□□□ -0.59
SFSWAP-208ENST00000539506 GABARAPH6UMI1 98 aa11.4□□□□□ -0.59
SFSWAP-208ENST00000539506 WISP1O95388 367 aa11.4□□□□□ -0.59
SFSWAP-208ENST00000539506 TGM6O95932 706 aa11.4□□□□□ -0.59
SFSWAP-208ENST00000539506 CENPAP49450 140 aa11.4□□□□□ -0.59
SFSWAP-208ENST00000539506 POU4F2Q12837 409 aa11.4□□□□□ -0.59
SFSWAP-208ENST00000539506 AKIRIN2Q53H80 203 aa11.4□□□□□ -0.59
SFSWAP-208ENST00000539506 LINC01590Q5TEZ4 76 aa11.4□□□□□ -0.59
SFSWAP-208ENST00000539506 PARGQ86W56 976 aa11.4□□□□□ -0.59
SFSWAP-208ENST00000539506 OR10K1Q8NGX5 313 aa11.4□□□□□ -0.59
SFSWAP-208ENST00000539506 RLN3Q8WXF3 142 aa11.4□□□□□ -0.59
SFSWAP-208ENST00000539506 MOGAT1Q96PD6 335 aa11.4□□□□□ -0.59
SFSWAP-208ENST00000539506 OPN4Q9UHM6 478 aa11.4□□□□□ -0.59
SFSWAP-208ENST00000539506 KIF25Q9UIL4 384 aa11.4□□□□□ -0.59
SFSWAP-208ENST00000539506 FARSAQ9Y285 508 aaKnown RBP11.4□□□□□ -0.59
SFSWAP-208ENST00000539506 A0A1B0GUH1 482 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 CD3DP04234 171 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 GUSBP08236 651 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 RNH1P13489 461 aaKnown RBP11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 CTSEP14091 401 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 RPS4XP62701 263 aaKnown RBP11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 FUT7Q11130 342 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 GK2Q14410 553 aaPredicted RBP11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 KLHL26Q53HC5 615 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 TMEM205Q6UW68 189 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 LRRC69Q6ZNQ3 347 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF550Q7Z398 422 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 ZFP82Q8N141 532 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 ELF4Q99607 663 aaPredicted RBP11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 SLC38A3Q99624 504 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 NPAS1Q99742 590 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 RTN4RQ9BZR6 473 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 SYNDIG1Q9H7V2 258 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 MKKSQ9NPJ1 570 aaPredicted RBP11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 PRTFDC1Q9NRG1 225 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 MPDZO75970 2070 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 PCDH15Q96QU1 1955 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 TMEM272A0A1B0GTI8 110 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 OR5K4A6NMS3 321 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF879B4DU55 563 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 DCTN6O00399 190 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 HIST1H2ABP04908 130 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 MAOBP27338 520 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 GABRA4P48169 554 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 CCR4P51679 360 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 ART1P52961 327 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 LTBQ06643 244 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 TAF13Q15543 124 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF626Q68DY1 528 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 DPY19L2P2Q6ZN68 376 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 HIST3H2AQ7L7L0 130 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 SYS1Q8N2H4 156 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 HIST1H2ACQ93077 130 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 NKD1Q969G9 470 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 DGAT2Q96PD7 388 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 TMEM231Q9H6L2 316 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 EXO5Q9H790 373 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 Q9N2J8 555 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 TAS2R5Q9NYW4 299 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 PTTG3PQ9NZH4 202 aa11.39□□□□□ -0.59
SFSWAP-208ENST00000539506 UBE2QL1A1L167 161 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 OR2M5A3KFT3 312 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms