RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 TRHRP34981 398 aaPredicted RBP13.35□□□□□ -0.27
CACNB1-206ENST00000539338 OXA1LQ15070 435 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 GLYATL3Q5SZD4 288 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 PRAMEF9Q5VWM5 478 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 NIPAL3Q6P499 406 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 MKXQ8IYA7 352 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 FAM26EQ8N5C1 309 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 ZFAND1Q8TCF1 268 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 PAPOLGQ9BWT3 736 aaKnown RBP13.35□□□□□ -0.27
CACNB1-206ENST00000539338 PPA2Q9H2U2 334 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 PLEKHA3Q9HB20 300 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 BIN3Q9NQY0 253 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 ADAM18Q9Y3Q7 739 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 OR7C1O76099 320 aaPredicted RBP13.35□□□□□ -0.27
CACNB1-206ENST00000539338 GLCEO94923 617 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 SBK2P0C263 348 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 PPP3CBP16298 524 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 ELK1P19419 428 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 TRA2AQ13595 282 aaKnown RBP eCLIP13.35□□□□□ -0.27
CACNB1-206ENST00000539338 STEAP1BQ6NZ63 245 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 SLC16A14Q7RTX9 510 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 SMRP1Q8NCR6 262 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 OR14K1Q8NGZ2 314 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 SMAP2Q8WU79 429 aaPredicted RBP13.35□□□□□ -0.27
CACNB1-206ENST00000539338 SGPP1Q9BX95 441 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 CHST2Q9Y4C5 530 aa13.35□□□□□ -0.27
CACNB1-206ENST00000539338 PEX11BO96011 259 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 NID1P14543 1247 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 CD82P27701 267 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 ZNF674Q2M3X9 581 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 TCTN3Q6NUS6 607 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 PAPD4Q6PIY7 484 aaKnown RBP13.34□□□□□ -0.27
CACNB1-206ENST00000539338 FBXW12Q6X9E4 464 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 OR9K2Q8NGE7 335 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 CCDC74AQ96AQ1 378 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 FAM3DQ96BQ1 224 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 FGGYQ96C11 551 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 ZNF681Q96N22 645 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 METTL9Q9H1A3 318 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 SLC38A1Q9H2H9 487 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 PTTG3PQ9NZH4 202 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 SLC23A2Q9UGH3 650 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 STEAP1Q9UHE8 339 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 CORINQ9Y5Q5 1042 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 FZD6O60353 706 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 SIX6O95475 246 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 DHRS13Q6UX07 377 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 Q6ZTK2 550 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 OR56B1Q8NGI3 324 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 DYNC2LI1Q8TCX1 351 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 STACQ99469 402 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 SSX3Q99909 188 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 CDCA4Q9BXL8 241 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 PLCXD1Q9NUJ7 323 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 SLC22A23A1A5C7 686 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 ADAM23O75077 832 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 MED6O75586 246 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 ZNF136P52737 540 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 DPTQ07507 201 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 OR56B2PQ8NGI1 322 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 FYTTD1Q96QD9 318 aaKnown RBP13.34□□□□□ -0.27
CACNB1-206ENST00000539338 MYO7AQ13402 2215 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 IGHV3-20A0A0C4DH32 117 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 FGF17O60258 216 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 SNRNP70P08621 437 aaKnown RBP13.34□□□□□ -0.27
CACNB1-206ENST00000539338 GCH1P30793 250 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 TGM4P49221 684 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 TAS2R46P59540 309 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 RAB4BP61018 213 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 C17orf67Q0P5P2 114 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 YOD1Q5VVQ6 348 aaPredicted RBP13.34□□□□□ -0.27
CACNB1-206ENST00000539338 SLC7A6Q92536 515 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 ZNF578Q96N58 590 aaPredicted RBP13.34□□□□□ -0.27
CACNB1-206ENST00000539338 SNX18Q96RF0 628 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 MICU1Q9BPX6 476 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 LYRM4Q9HD34 91 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 DUSP22Q9NRW4 184 aa13.34□□□□□ -0.27
CACNB1-206ENST00000539338 C19orf53Q9UNZ5 99 aaPredicted RBP13.34□□□□□ -0.27
CACNB1-206ENST00000539338 CD1EP15812 388 aa13.33□□□□□ -0.27
CACNB1-206ENST00000539338 MRPL19P49406 292 aaKnown RBP13.33□□□□□ -0.27
CACNB1-206ENST00000539338 ZNF620Q6ZNG0 422 aa13.33□□□□□ -0.27
CACNB1-206ENST00000539338 GDPD3Q7L5L3 318 aa13.33□□□□□ -0.27
CACNB1-206ENST00000539338 ZNF454Q8N9F8 522 aa13.33□□□□□ -0.27
CACNB1-206ENST00000539338 GPBAR1Q8TDU6 330 aa13.33□□□□□ -0.27
CACNB1-206ENST00000539338 SDSLQ96GA7 329 aa13.33□□□□□ -0.27
CACNB1-206ENST00000539338 SCN9AQ15858 1988 aa13.33□□□□□ -0.27
CACNB1-206ENST00000539338 C5orf67F2Z3F1 127 aa13.33□□□□□ -0.28
CACNB1-206ENST00000539338 CTSLP07711 333 aa13.33□□□□□ -0.28
CACNB1-206ENST00000539338 BLVRBP30043 206 aaPredicted RBP13.33□□□□□ -0.28
CACNB1-206ENST00000539338 ARHGAP11BQ3KRB8 267 aa13.33□□□□□ -0.28
CACNB1-206ENST00000539338 BBS1Q8NFJ9 593 aa13.33□□□□□ -0.28
CACNB1-206ENST00000539338 RNF128Q8TEB7 428 aa13.33□□□□□ -0.28
CACNB1-206ENST00000539338 PLAC1Q9HBJ0 212 aa13.33□□□□□ -0.28
CACNB1-206ENST00000539338 NDUFB11Q9NX14 153 aa13.33□□□□□ -0.28
CACNB1-206ENST00000539338 DNAJB11Q9UBS4 358 aa13.33□□□□□ -0.28
CACNB1-206ENST00000539338 CGGBP1Q9UFW8 167 aaPredicted RBP13.33□□□□□ -0.28
CACNB1-206ENST00000539338 A0A0U1RQK1 487 aa13.33□□□□□ -0.28
CACNB1-206ENST00000539338 TLCD2A6NGC4 264 aa13.33□□□□□ -0.28
CACNB1-206ENST00000539338 TRAPPC2LH3BP13 241 aa13.33□□□□□ -0.28
CACNB1-206ENST00000539338 HSPB6O14558 160 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms