RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 RPS11P62280 158 aaKnown RBP eCLIP18.3■□□□□ 0.52
DDX55-205ENST00000538744 HSPB2Q16082 182 aa18.3■□□□□ 0.52
DDX55-205ENST00000538744 HBMQ6B0K9 141 aa18.3■□□□□ 0.52
DDX55-205ENST00000538744 THEM6Q8WUY1 208 aa18.3■□□□□ 0.52
DDX55-205ENST00000538744 DIRAS2Q96HU8 199 aa18.3■□□□□ 0.52
DDX55-205ENST00000538744 KCNK17Q96T54 332 aa18.3■□□□□ 0.52
DDX55-205ENST00000538744 SDHCQ99643 169 aaPredicted RBP18.3■□□□□ 0.52
DDX55-205ENST00000538744 PDCD1LG2Q9BQ51 273 aa18.3■□□□□ 0.52
DDX55-205ENST00000538744 TSPAN10Q9H1Z9 355 aaPredicted RBP18.3■□□□□ 0.52
DDX55-205ENST00000538744 RPH3AQ9Y2J0 694 aaPredicted RBP18.3■□□□□ 0.52
DDX55-205ENST00000538744 PCSK5Q92824 1860 aa18.3■□□□□ 0.52
DDX55-205ENST00000538744 TRAV1-2A0A0B4J238 106 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 ZNF593O00488 134 aaPredicted RBP18.29■□□□□ 0.52
DDX55-205ENST00000538744 PFDN1O60925 122 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 UPK3AO75631 287 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 GLO1Q04760 184 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 C19orf57Q0VDD7 668 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 ZNF468Q5VIY5 522 aaPredicted RBP18.29■□□□□ 0.52
DDX55-205ENST00000538744 LIPNQ5VXI9 398 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 FAM131AQ6UXB0 335 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 TRILQ7L0X0 811 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 SLC22A16Q86VW1 577 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 ASB17Q8WXJ9 295 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 PHYHIPQ92561 330 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 RNF166Q96A37 237 aaPredicted RBP18.29■□□□□ 0.52
DDX55-205ENST00000538744 TMEM41AQ96HV5 264 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 SACM1LQ9NTJ5 587 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 MRPL22Q9NWU5 206 aaKnown RBP18.29■□□□□ 0.52
DDX55-205ENST00000538744 ZNF281Q9Y2X9 895 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 A0A1W2PNR3 127 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 RPP14O95059 124 aaKnown RBP18.29■□□□□ 0.52
DDX55-205ENST00000538744 OPN1LWP04000 364 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 UCHL1P09936 223 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 SFTPDP35247 375 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 NANOS3P60323 173 aaKnown RBP18.29■□□□□ 0.52
DDX55-205ENST00000538744 TIGD3Q6B0B8 471 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 NR2C2APQ86WQ0 139 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 FOXN4Q96NZ1 517 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 MED29Q9NX70 200 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 B3GAT1Q9P2W7 334 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 KCNG2Q9UJ96 466 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 DKKL1Q9UK85 242 aa18.29■□□□□ 0.52
DDX55-205ENST00000538744 G3V3Y1 287 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 SEC14L5O43304 696 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 P04436 131 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 PSKH1P11801 424 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 RPS27P42677 84 aaKnown RBP18.28■□□□□ 0.52
DDX55-205ENST00000538744 PSMD7P51665 324 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 ALKBH1Q13686 389 aaKnown RBP18.28■□□□□ 0.52
DDX55-205ENST00000538744 TRIP6Q15654 476 aaKnown RBP18.28■□□□□ 0.52
DDX55-205ENST00000538744 ZNF79Q15937 498 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 ETFDHQ16134 617 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 CSRP2Q16527 193 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 TMEM176BQ3YBM2 270 aaPredicted RBP18.28■□□□□ 0.52
DDX55-205ENST00000538744 YIF1BQ5BJH7 314 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 IDNKQ5T6J7 187 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 SLC18B1Q6NT16 456 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 UNQ9370/PRO34162Q6UXP9 181 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 UEVLDQ8IX04 471 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 KCTD12Q96CX2 325 aaKnown RBP18.28■□□□□ 0.52
DDX55-205ENST00000538744 TXNDC15Q96J42 360 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 JSRP1Q96MG2 331 aaPredicted RBP18.28■□□□□ 0.52
DDX55-205ENST00000538744 GNRHR2Q96P88 292 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 UBL7Q96S82 380 aaPredicted RBP18.28■□□□□ 0.52
DDX55-205ENST00000538744 TTYH2Q9BSA4 534 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 FAM117AQ9C073 453 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 POLE4Q9NR33 117 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 ADAM30Q9UKF2 790 aa18.28■□□□□ 0.52
DDX55-205ENST00000538744 COA3Q9Y2R0 106 aaPredicted RBP18.28■□□□□ 0.52
DDX55-205ENST00000538744 FABP12A6NFH5 140 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 HPGDSO60760 199 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 SPARCP09486 303 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 BIDP55957 195 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 DEFA1P59665 94 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 DEFA3P59666 94 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 ADAM8P78325 824 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 SLC35A1P78382 337 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 ZNF239Q16600 458 aaKnown RBP18.27■□□□□ 0.52
DDX55-205ENST00000538744 C11orf91Q3C1V1 193 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 ACER2Q5QJU3 275 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 B3GNTL1Q67FW5 361 aaPredicted RBP18.27■□□□□ 0.52
DDX55-205ENST00000538744 XKRXQ6PP77 449 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 MDGA2Q7Z553 956 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 RAB43Q86YS6 212 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 OR8H2Q8N162 312 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 POC5Q8NA72 575 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 KIAA1143Q96AT1 154 aaPredicted RBP18.27■□□□□ 0.52
DDX55-205ENST00000538744 OR14A2Q96R54 314 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 SRRQ9GZT4 340 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 SP140LQ9H930 580 aa18.27■□□□□ 0.52
DDX55-205ENST00000538744 ING1Q9UK53 422 aaPredicted RBP18.27■□□□□ 0.52
DDX55-205ENST00000538744 ZNF879B4DU55 563 aa18.26■□□□□ 0.51
DDX55-205ENST00000538744 TERTO14746 1132 aaKnown RBP18.26■□□□□ 0.51
DDX55-205ENST00000538744 RAD1O60671 282 aa18.26■□□□□ 0.51
DDX55-205ENST00000538744 SLC19A2O60779 497 aa18.26■□□□□ 0.51
DDX55-205ENST00000538744 CBR3O75828 277 aa18.26■□□□□ 0.51
DDX55-205ENST00000538744 ZFPL1O95159 310 aa18.26■□□□□ 0.51
DDX55-205ENST00000538744 RAB3BP20337 219 aa18.26■□□□□ 0.51
DDX55-205ENST00000538744 P2RY4P51582 365 aa18.26■□□□□ 0.51
DDX55-205ENST00000538744 RAET1LQ5VY80 246 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms