RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 ATF6BQ99941 703 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 MRPL39Q9NYK5 338 aaKnown RBP12.66□□□□□ -0.38
ACTN1-205ENST00000538545 GTF2A1LQ9UNN4 478 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 DMXL2Q8TDJ6 3036 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 A0A075B6Q4 140 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 PFDN1O60925 122 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 DPP4P27487 766 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 HSF1Q00613 529 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 OC90Q02509 493 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-205ENST00000538545 CHAF1BQ13112 559 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 SRSF6Q13247 344 aaKnown RBP12.66□□□□□ -0.38
ACTN1-205ENST00000538545 P2RY14Q15391 338 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 TRIP6Q15654 476 aaKnown RBP12.66□□□□□ -0.38
ACTN1-205ENST00000538545 CDCP2Q5VXM1 449 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 SLC22A10Q63ZE4 541 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 GPR139Q6DWJ6 353 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 SPINK14Q6IE38 97 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 PLXDC2Q6UX71 529 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 YRDCQ86U90 279 aaKnown RBP12.66□□□□□ -0.38
ACTN1-205ENST00000538545 POC5Q8NA72 575 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 SMIM19Q96E16 107 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 INTS14Q96SY0 518 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 HES7Q9BYE0 225 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 SERINC1Q9NRX5 453 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 DSPP15924 2871 aaKnown RBP12.65□□□□□ -0.38
ACTN1-205ENST00000538545 NPIPA5E9PKD4 350 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 EIF1AXP47813 144 aaKnown RBP12.65□□□□□ -0.38
ACTN1-205ENST00000538545 RPS15P62841 145 aaKnown RBP12.65□□□□□ -0.38
ACTN1-205ENST00000538545 ADAM8P78325 824 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 BDH1Q02338 343 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 MFAP5Q13361 173 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 ZNF684Q5T5D7 378 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 CDC20BQ86Y33 519 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 BEST3Q8N1M1 668 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 MFSD8Q8NHS3 518 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 CHPT1Q8WUD6 406 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 MRGPRX4Q96LA9 322 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 CHST11Q9NPF2 352 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 SDHAF3Q9NRP4 125 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 DEPPQ9NTK1 212 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 FRRS1LQ9P0K9 344 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 CRNNQ9UBG3 495 aaPredicted RBP12.65□□□□□ -0.38
ACTN1-205ENST00000538545 NPIPA1Q9UND3 350 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 AK6Q9Y3D8 172 aaKnown RBP12.65□□□□□ -0.38
ACTN1-205ENST00000538545 A3GALT2U3KPV4 340 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 IGLV1-36A0A0B4J1U3 117 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 UPK3AO75631 287 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 ALOX5APP20292 161 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 TGM1P22735 817 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 APEX1P27695 318 aaKnown RBP12.65□□□□□ -0.38
ACTN1-205ENST00000538545 ACTA2P62736 377 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 ACTG2P63267 376 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 CD300CQ08708 224 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 C3orf33Q6P1S2 294 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 FAM131AQ6UXB0 335 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 ZNF227Q86WZ6 799 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 FADS6Q8N9I5 356 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 ZNF248Q8NDW4 579 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 THOC3Q96J01 351 aaKnown RBP12.65□□□□□ -0.38
ACTN1-205ENST00000538545 PCDHGB7Q9Y5F8 929 aa12.65□□□□□ -0.38
ACTN1-205ENST00000538545 MAP1BP46821 2468 aaKnown RBP12.65□□□□□ -0.39
ACTN1-205ENST00000538545 CACNA1GO43497 2377 aa12.65□□□□□ -0.39
ACTN1-205ENST00000538545 IQCMA0A1B0GVH7 501 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 PINLYPA6NC86 204 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-205ENST00000538545 EIF1AYO14602 144 aaKnown RBP12.64□□□□□ -0.39
ACTN1-205ENST00000538545 PIN1P1O15428 100 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 SC5DO75845 299 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 SUMO3P55854 103 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-205ENST00000538545 EMC4Q5J8M3 183 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 ACER2Q5QJU3 275 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 OR7E24Q6IFN5 339 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 ASB10Q8WXI3 467 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 PSMF1Q92530 271 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 UCN2Q96RP3 112 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 PTGES2Q9H7Z7 377 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 FREM1Q5H8C1 2179 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 OGG1O15527 345 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 ZIC3O60481 467 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 CDAP32320 146 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 SSPNQ14714 243 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 OXA1LQ15070 435 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 UBQLNLQ8IYU4 475 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 OR1J4Q8NGS1 313 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 PAQR8Q8TEZ7 354 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 DTNBP1Q96EV8 351 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 LIN37Q96GY3 246 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-205ENST00000538545 PALMDQ9NP74 551 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 NOX4Q9NPH5 578 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 BRD7Q9NPI1 651 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 PLA2G3Q9NZ20 509 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 FBXL3Q9UKT7 428 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 SLC22A13Q9Y226 551 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 RASD1Q9Y272 281 aa12.64□□□□□ -0.39
ACTN1-205ENST00000538545 OR2M5A3KFT3 312 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 HTR3EA5X5Y0 456 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 ABHD16AO95870 558 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 STARP49675 285 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 ZNF45Q02386 682 aa12.63□□□□□ -0.39
ACTN1-205ENST00000538545 LINC00299Q6ZSB3 139 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms