RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 PEX19P40855 299 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 SH3BGRP55822 239 aaPredicted RBP11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 LCN6P62502 163 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 SORDQ00796 357 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 NPRL3Q12980 569 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 HIST3H3Q16695 136 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 CEACAM16Q2WEN9 425 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 PHYHD1Q5SRE7 291 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 THEM4Q5T1C6 240 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 SFRP5Q5T4F7 317 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 LPCAT4Q643R3 524 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 LEG1Q6P5S2 330 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 LRFN4Q6PJG9 635 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 LINGO2Q7L985 606 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 PACRGLQ8N7B6 248 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 ZNF433Q8N7K0 673 aaPredicted RBP11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 STEAP2Q8NFT2 490 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 OR4Q3Q8NH05 313 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 MCHR2Q969V1 340 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 NMNAT3Q96T66 252 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 SLC29A1Q99808 456 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 GABARAPL3Q9BY60 117 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 PRRG3Q9BZD7 231 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 SYT4Q9H2B2 425 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 VCXQ9H320 206 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 RIBC2Q9H4K1 309 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 SLC25A19Q9HC21 320 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 NKX1-2Q9UD57 310 aaPredicted RBP11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 KLHL21Q9UJP4 597 aa11.22□□□□□ -0.61
CDK2AP1-204ENST00000538446 MYO7BQ6PIF6 2116 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 DOCK7Q96N67 2140 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 A1L4Q6 167 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 ZNF99A8MXY4 864 aaPredicted RBP11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 PRSS44E7EML9 344 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 DHHO43323 396 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 RAD51DO75771 328 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 ATP6V1G2O95670 118 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 HMGN1P05114 100 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 ZNF3P17036 446 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 GRNP28799 593 aaKnown RBP11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 HOXC12P31275 282 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 CDKN2AP42771 156 aaKnown RBP11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 ZNF84P51523 738 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 FOXG1P55316 489 aaPredicted RBP11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 ARF1P84077 181 aaKnown RBP11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 CDK5Q00535 292 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 FMODQ06828 376 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 PTGES3Q15185 160 aaKnown RBP11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 STK11Q15831 433 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 OGFRL1Q5TC84 451 aaPredicted RBP11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 OR7E24Q6IFN5 339 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 PTCHD4Q6ZW05 846 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 BHLHA15Q7RTS1 189 aaPredicted RBP11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 C1orf162Q8NEQ5 155 aaPredicted RBP11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 SDR9C7Q8NEX9 313 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 OR52E2Q8NGJ4 325 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 NMD3Q96D46 503 aaKnown RBP11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 PLEKHA8Q96JA3 519 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 SLC38A2Q96QD8 506 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 SNX18Q96RF0 628 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 USB1Q9BQ65 265 aaKnown RBP11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 ACTR6Q9GZN1 396 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 NPDC1Q9NQX5 325 aaPredicted RBP11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 CMC2Q9NRP2 79 aa11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 VSX1Q9NZR4 365 aaPredicted RBP11.21□□□□□ -0.61
CDK2AP1-204ENST00000538446 MPDZO75970 2070 aa11.21□□□□□ -0.62
CDK2AP1-204ENST00000538446 DOPEY1Q5JWR5 2465 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 NCOA6Q14686 2063 aaPredicted RBP11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 ARHGAP21Q5T5U3 1957 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 SLC2A10O95528 541 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 CLDN1O95832 211 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 PPP3CBP16298 524 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 PAICSP22234 425 aaKnown RBP11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 CRABP1P29762 137 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 CCKARP32238 428 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 GUCA1AP43080 201 aaPredicted RBP11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 TSC22D1Q15714 1073 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 C10orf128Q5T292 105 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 TMEM236Q5W0B7 351 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 ACSM5Q6NUN0 579 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 ANKRD16Q6P6B7 361 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 DNM1P34Q6PK57 102 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 GALNT4Q8N4A0 578 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 C17orf78Q8N4C9 275 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 CYB561A3Q8NBI2 242 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 OR1K1Q8NGR3 316 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 NSMAFQ92636 917 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 ZNF837Q96EG3 531 aaPredicted RBP11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 RDH12Q96NR8 316 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 FOXB1Q99853 325 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 OR10A4Q9H209 315 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 RERGLQ9H628 205 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 RPRD1BQ9NQG5 326 aaKnown RBP11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 SMPD3Q9NY59 655 aaPredicted RBP11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 NDRG3Q9UGV2 375 aa11.2□□□□□ -0.62
CDK2AP1-204ENST00000538446 HELZ2Q9BYK8 2649 aaKnown RBP11.19□□□□□ -0.62
CDK2AP1-204ENST00000538446 USP9XQ93008 2570 aaPredicted RBP11.19□□□□□ -0.62
CDK2AP1-204ENST00000538446 TUBAL3A6NHL2 446 aa11.19□□□□□ -0.62
CDK2AP1-204ENST00000538446 ZAR1LA6NP61 321 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms