RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 CTHRC1Q96CG8 243 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 ERVH48-1M5A8F1 160 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 FAAHO00519 579 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 ZIC3O60481 467 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 SELENOFO60613 162 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 DBHP09172 617 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 HSD17B1P14061 328 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 CDKN1AP38936 164 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 GABRA2P47869 451 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 CCL8P80075 99 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 SKP2Q13309 424 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 TTC23Q5W5X9 447 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 ACSM5Q6NUN0 579 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 CHST4Q8NCG5 386 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 PLA2G12AQ9BZM1 189 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 MSL2Q9HCI7 577 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 NGBQ9NPG2 151 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 TMEM5Q9Y2B1 443 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 NBEAL1Q6ZS30 2694 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 C12orf71A8MTZ7 269 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 NPPAP01160 153 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 HMGN1P05114 100 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 GABRA1P14867 456 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 SELEP16581 610 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 RUNX1T1Q06455 604 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 SNTB2Q13425 540 aaKnown RBP6.45□□□□□ -1.38
MSH6-209ENST00000538136 KLHL26Q53HC5 615 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 WDR88Q6ZMY6 472 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 IZUMO1Q8IYV9 350 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 OR2T4Q8NH00 348 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 ST8SIA1Q92185 356 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 PAPOLGQ9BWT3 736 aaKnown RBP6.45□□□□□ -1.38
MSH6-209ENST00000538136 ANGPTL4Q9BY76 406 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 UBQLN3Q9H347 655 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 SNTG1Q9NSN8 517 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 ACER3Q9NUN7 267 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 TMEM200CA6NKL6 621 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 SLITRK5O94991 958 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 YES1P07947 543 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 CD14P08571 375 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 FCGR2AP12318 317 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 ADH7P40394 386 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 HSPA13P48723 471 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.44□□□□□ -1.38
MSH6-209ENST00000538136 PDCD1Q15116 288 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 CEP78Q5JTW2 689 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 Q6ZS92 163 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 DCXRQ7Z4W1 244 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 KLBQ86Z14 1044 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 UBALD1Q8TB05 177 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 CHCHD6Q9BRQ6 235 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 POLR2J2Q9GZM3 115 aaKnown RBP6.44□□□□□ -1.38
MSH6-209ENST00000538136 C1orf21Q9H246 121 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 SLCO5A1Q9H2Y9 848 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 TMEM38AQ9H6F2 299 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 HHATLQ9HCP6 504 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 QPCTLQ9NXS2 382 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 ZNF226Q9NYT6 803 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 PLEKHA6Q9Y2H5 1048 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 CLDN16Q9Y5I7 305 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 LOC100130705A0A1B0GUX0 176 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 ACOD1A6NK06 481 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 ZNF814B7Z6K7 855 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 FADS1O60427 444 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 DUSP1P28562 367 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 INPP1P49441 399 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 DAP3P51398 398 aaKnown RBP6.44□□□□□ -1.38
MSH6-209ENST00000538136 RAC3P60763 192 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 MICAQ29983 383 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 ZNF774Q6NX45 483 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 MSANTD1Q6ZTZ1 278 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 CAMKMTQ7Z624 323 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 ZNF101Q8IZC7 436 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 SLC25A43Q8WUT9 341 aaPredicted RBP6.44□□□□□ -1.38
MSH6-209ENST00000538136 FAM46BQ96A09 425 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 FOXB1Q99853 325 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 CCM2LQ9NUG4 571 aaPredicted RBP6.44□□□□□ -1.38
MSH6-209ENST00000538136 MGAT4BQ9UQ53 548 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 LOC102723996A0A087X1L8 192 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 ATP6V1G2-DDX39BF2Z307 99 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 SLC22A2O15244 555 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 KHDRBS3O75525 346 aaKnown RBP6.44□□□□□ -1.38
MSH6-209ENST00000538136 CCDC159P0C7I6 412 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 ZNF20P17024 532 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 NAGAP17050 411 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 CHMP24386 653 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 MAGEB1P43366 347 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 GGTLC2Q14390 218 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 KRTCAP3Q53RY4 240 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 SFRP5Q5T4F7 317 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 FAM214BQ7L5A3 538 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 ZNF441Q8N8Z8 693 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 OR1J1Q8NGS3 322 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 ZBTB8AQ96BR9 441 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 CEP19Q96LK0 163 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 GPR137Q96N19 417 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 B3GNT4Q9C0J1 378 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 MALT1Q9UDY8 824 aa6.44□□□□□ -1.38
MSH6-209ENST00000538136 BLOC1S6Q9UL45 172 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms