RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 U3KQ87 197 aa9.72□□□□□ -0.85
CLIP1-210ENST00000538120 TECTAO75443 2155 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 SLC19A2O60779 497 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 SLC22A5O76082 557 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 ZNF28P17035 718 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 PTBP1P26599 531 aaKnown RBP eCLIP9.71□□□□□ -0.85
CLIP1-210ENST00000538120 ITPKBP27987 946 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 SSTR2P30874 369 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 CDKN2AP42771 156 aaKnown RBP9.71□□□□□ -0.85
CLIP1-210ENST00000538120 DIO1P49895 249 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 NTRK2Q16620 822 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 MRPL14Q6P1L8 145 aaKnown RBP9.71□□□□□ -0.85
CLIP1-210ENST00000538120 SLC23A3Q6PIS1 610 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 PAPD4Q6PIY7 484 aaKnown RBP9.71□□□□□ -0.85
CLIP1-210ENST00000538120 TMEM205Q6UW68 189 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 NUP54Q7Z3B4 507 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 C10orf53Q8N6V4 93 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 EXD3Q8N9H8 876 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 BEST4Q8NFU0 473 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 CEP76Q8TAP6 659 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 GPR119Q8TDV5 335 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 Q96M85 177 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 TRAF4Q9BUZ4 470 aaPredicted RBP9.71□□□□□ -0.85
CLIP1-210ENST00000538120 SLC26A1Q9H2B4 701 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 HEXA-AS1Q9H8Q6 139 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 B3GNT2Q9NY97 397 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 NKIRAS2Q9NYR9 191 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 ELF5Q9UKW6 265 aaPredicted RBP9.71□□□□□ -0.85
CLIP1-210ENST00000538120 SPEF1Q9Y4P9 236 aa9.71□□□□□ -0.85
CLIP1-210ENST00000538120 TEX13CA0A0J9YWL9 993 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 D6RAR5 112 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 CER1O95813 267 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 BGLAPP02818 100 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 CD14P08571 375 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 CD3GP09693 182 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 SPI1P17947 270 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 PGCP20142 388 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 AHCYP23526 432 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 P2RX1P51575 399 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 FBXW4P57775 412 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 OR12D2P58182 307 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 E2F1Q01094 437 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 POU4F2Q12837 409 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 POU4F3Q15319 338 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 SLC25A35Q3KQZ1 300 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 MTFR2Q6P444 385 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 MEIOBQ8N635 442 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 KDF1Q8NAX2 398 aaPredicted RBP9.71□□□□□ -0.86
CLIP1-210ENST00000538120 DUSP19Q8WTR2 217 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 THAP3Q8WTV1 239 aaPredicted RBP9.71□□□□□ -0.86
CLIP1-210ENST00000538120 HGDQ93099 445 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 ANAPC16Q96DE5 110 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 CRB3Q9BUF7 120 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 PTDSS2Q9BVG9 487 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 SMOC1Q9H4F8 434 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 GLTPQ9NZD2 209 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 ADAM30Q9UKF2 790 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 CACNG2Q9Y698 323 aa9.71□□□□□ -0.86
CLIP1-210ENST00000538120 MUC3AQ02505 3323 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 SHOXO15266 292 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 MAGEB4O15481 346 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-210ENST00000538120 CDC40O60508 579 aaKnown RBP eCLIP9.7□□□□□ -0.86
CLIP1-210ENST00000538120 RGS9O75916 674 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-210ENST00000538120 TXNDC12O95881 172 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 MT-ND5P03915 603 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 APEHP13798 732 aaKnown RBP9.7□□□□□ -0.86
CLIP1-210ENST00000538120 RPS2P15880 293 aaKnown RBP9.7□□□□□ -0.86
CLIP1-210ENST00000538120 CCR6P51684 374 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 AP2S1P53680 142 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-210ENST00000538120 CTXN1P60606 82 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 BTG1P62324 171 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 RPL18Q07020 188 aaKnown RBP9.7□□□□□ -0.86
CLIP1-210ENST00000538120 ZFP36L1Q07352 338 aaKnown RBP9.7□□□□□ -0.86
CLIP1-210ENST00000538120 CBFBQ13951 182 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 SLC36A2Q495M3 483 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 ALG10Q5BKT4 473 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 OXLD1Q5BKU9 147 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 LINC01590Q5TEZ4 76 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 FAM69BQ5VUD6 431 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 HBMQ6B0K9 141 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 LYPD4Q6UWN0 246 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 RPTNQ6XPR3 784 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 ESPNLQ6ZVH7 1005 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 CPEB2Q7Z5Q1 589 aaKnown RBP9.7□□□□□ -0.86
CLIP1-210ENST00000538120 ADGRG3Q86Y34 549 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 NUBPLQ8TB37 319 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 METTL21AQ8WXB1 218 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 C8orf44Q96CB5 159 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 SCMH1Q96GD3 660 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 C4orf36Q96KX1 117 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 UBL7Q96S82 380 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-210ENST00000538120 CCDC86Q9H6F5 360 aaKnown RBP9.7□□□□□ -0.86
CLIP1-210ENST00000538120 BEX1Q9HBH7 125 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 EIF3KQ9UBQ5 218 aaKnown RBP9.7□□□□□ -0.86
CLIP1-210ENST00000538120 KCNN3Q9UGI6 736 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 SLC6A5Q9Y345 797 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 TRBV11-1A0A0K0K1C0 115 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 TMEM72A0PK05 275 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 J3QLW9 94 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 MASP2O00187 686 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms