RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 STEAP1BQ6NZ63 245 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SLC24A5Q71RS6 500 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 LRRC25Q8N386 305 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 OR13C9Q8NGT0 318 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF461Q8TAF7 563 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 NPRL2Q8WTW4 380 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TMEM255BQ8WV15 326 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 NOL4LQ96MY1 436 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SLC6A13Q9NSD5 602 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 KCMF1Q9P0J7 381 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 GAB2Q9UQC2 676 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 UBE2J1Q9Y385 318 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TMEM184BQ9Y519 407 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 UMAD1C9J7I0 102 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 FOXE1O00358 373 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 DCTN6O00399 190 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SOX1O00570 391 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SLC31A2O15432 143 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 COCHO43405 550 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 OR2T1O43869 369 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 NDUFB2O95178 105 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 NR2C1P13056 603 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SERPINA2P20848 420 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 HOXA6P31267 233 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 C4orf17Q53FE4 359 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 ALKAL1Q6UXT8 129 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 HSD17B11Q8NBQ5 300 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 BBS1Q8NFJ9 593 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 OR13D1Q8NGV5 346 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SLC41A2Q96JW4 573 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SAMD10Q9BYL1 202 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 METTL9Q9H1A3 318 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 BCL2L10Q9HD36 194 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF281Q9Y2X9 895 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TMEM14AQ9Y6G1 99 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 FAM221BA6H8Z2 402 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 OR6C68A6NDL8 312 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 OR6C6A6NF89 314 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 NPIPB15A6NHN6 443 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 DRGXA6NNA5 263 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 PHOX2AO14813 284 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SLC2A10O95528 541 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 MPIG6BO95866 241 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 WNT1P04628 370 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SERPINA5P05154 406 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 JMJD7P0C870 316 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 CD1CP29017 333 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SDHAP31040 664 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 PTGFRP43088 359 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SIM1P81133 766 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 COTL1Q14019 142 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SOHLH1Q5JUK2 328 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 OR4K14Q8NGD5 310 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 NEURL3Q96EH8 262 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF514Q96K75 400 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 URM1Q9BTM9 101 aaKnown RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 HCAR1Q9BXC0 346 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 CBY3A6NI87 242 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 OR8G3PP0DMU2 310 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 HTR2CP28335 458 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SLC6A12P48065 614 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SLC7A9P82251 487 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 DSC1Q08554 894 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 NCMAPQ5T1S8 102 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 ACSM5Q6NUN0 579 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 NHLRC1Q6VVB1 395 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 CMTM4Q8IZR5 234 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 PIGQQ9BRB3 760 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 YIPF1Q9Y548 306 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 CSAG2Q9Y5P2 127 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TRBV23-1A0A0A0MS06 115 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 OR2C1O95371 312 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 CSTAP01040 98 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 FABP4P15090 132 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 BTCP35070 178 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 VASPP50552 380 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 MAT1AQ00266 395 aaKnown RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TIAL1Q01085 375 aaKnown RBP eCLIP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SRSF4Q08170 494 aaKnown RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 PDE7AQ13946 482 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 DNM1P34Q6PK57 102 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 MEX3BQ6ZN04 569 aaKnown RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 Q6ZRG5 221 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 LRRTM4Q86VH4 590 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TRAM1L1Q8N609 369 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 OR51D1Q8NGF3 324 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 BTF3L4Q96K17 158 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 ACTRT3Q9BYD9 372 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TBL1XR1Q9BZK7 514 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TAF9BQ9HBM6 251 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 A0A087WV62 115 aa4.96□□□□□ -1.61
PTPRD-213ENST00000537002 BTBD17A6NE02 478 aa4.96□□□□□ -1.61
PTPRD-213ENST00000537002 MFNGO00587 321 aa4.96□□□□□ -1.61
PTPRD-213ENST00000537002 EPXP11678 715 aa4.96□□□□□ -1.61
PTPRD-213ENST00000537002 TBPP20226 339 aa4.96□□□□□ -1.61
PTPRD-213ENST00000537002 LAP3P28838 519 aa4.96□□□□□ -1.61
PTPRD-213ENST00000537002 SNU13P55769 128 aaKnown RBP4.96□□□□□ -1.61
PTPRD-213ENST00000537002 DLK1P80370 383 aa4.96□□□□□ -1.61
PTPRD-213ENST00000537002 CMTM8Q8IZV2 173 aa4.96□□□□□ -1.61
PTPRD-213ENST00000537002 APCDD1Q8J025 514 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms