RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 CCDC80Q76M96 950 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 LINGO2Q7L985 606 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 BIVMQ86UB2 503 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 SNX32Q86XE0 403 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 CALHM3Q86XJ0 350 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 LINC00482Q8N8I6 264 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 DTX3Q8N9I9 347 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 SCAIQ8N9R8 606 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 OR6T1Q8NGN1 323 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 OR1K1Q8NGR3 316 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 SMAP2Q8WU79 429 aaPredicted RBP6.14□□□□□ -1.43
YBX3-206ENST00000536823 C10orf82Q8WW14 230 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 LRRC58Q96CX6 371 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 SLC41A3Q96GZ6 507 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 RADILQ96JH8 1075 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 C18orf12Q96KH6 178 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 Q96MF0 132 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 OXGR1Q96P68 337 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 ZNF317Q96PQ6 595 aaPredicted RBP6.14□□□□□ -1.43
YBX3-206ENST00000536823 MCHR1Q99705 422 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 SH3GL1Q99961 368 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 LINC00470Q9BZP3 86 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 PCDHAC1Q9H158 963 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 NANOGQ9H9S0 305 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 OBP2BQ9NPH6 170 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 LAMP3Q9UQV4 416 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 TNFRSF18Q9Y5U5 241 aa6.14□□□□□ -1.43
YBX3-206ENST00000536823 TRAPPC13A5PLN9 417 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 CPSF4LA6NMK7 179 aaKnown RBP6.13□□□□□ -1.43
YBX3-206ENST00000536823 RPL36A-HNRNPH2H7BZ11 118 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 H7C1Q1 480 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 M0R1B8 84 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 SLC43A1O75387 559 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 UPK3AO75631 287 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 KRT33AO76009 404 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 LYPD3O95274 346 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 CD8AP01732 235 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 CDH2P19022 906 aaPredicted RBP6.13□□□□□ -1.43
YBX3-206ENST00000536823 CBLP22681 906 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 MDH1P40925 334 aaKnown RBP6.13□□□□□ -1.43
YBX3-206ENST00000536823 PRPS1P60891 318 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 IL1RL1Q01638 556 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 ROR2Q01974 943 aaKnown RBP6.13□□□□□ -1.43
YBX3-206ENST00000536823 PUDPQ08623 228 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 C1DQ13901 141 aaKnown RBP6.13□□□□□ -1.43
YBX3-206ENST00000536823 VEZF1Q14119 521 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 ETFDHQ16134 617 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 TBRG1Q3YBR2 411 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 HIKESHIQ53FT3 197 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 ENTPD8Q5MY95 495 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 HMBOX1Q6NT76 420 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 ERICH5Q6P6B1 374 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 SLC22A25Q6T423 547 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 CD300LDQ6UXZ3 194 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 B3GLCTQ6Y288 498 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 WDR88Q6ZMY6 472 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 UEVLDQ8IX04 471 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 TMEM123Q8N131 208 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 KDM8Q8N371 416 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 PCYOX1LQ8NBM8 494 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 OR4D11Q8NGI4 311 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 VANGL1Q8TAA9 524 aaPredicted RBP6.13□□□□□ -1.43
YBX3-206ENST00000536823 MAGEE2Q8TD90 523 aaPredicted RBP6.13□□□□□ -1.43
YBX3-206ENST00000536823 SLC26A7Q8TE54 656 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 RASSF5Q8WWW0 418 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 BCL2L2Q92843 193 aaPredicted RBP6.13□□□□□ -1.43
YBX3-206ENST00000536823 RCN3Q96D15 328 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 MPP4Q96JB8 637 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 MOGAT1Q96PD6 335 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 OR2M2Q96R28 347 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 ECSITQ9BQ95 431 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 TRAF4Q9BUZ4 470 aaPredicted RBP6.13□□□□□ -1.43
YBX3-206ENST00000536823 FAIMQ9NVQ4 179 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 GID8Q9NWU2 228 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 MRPL39Q9NYK5 338 aaKnown RBP6.13□□□□□ -1.43
YBX3-206ENST00000536823 CISD1Q9NZ45 108 aaKnown RBP6.13□□□□□ -1.43
YBX3-206ENST00000536823 POU2F3Q9UKI9 436 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 NOX1Q9Y5S8 564 aa6.13□□□□□ -1.43
YBX3-206ENST00000536823 ARPC4-TTLL3A0A0A6YYG9 625 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 TRIM64A6NGJ6 449 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 TRIM64BA6NI03 449 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 FAM171A2A8MVW0 826 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 FAM220BPB1ANY3 271 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 E7EQL1 145 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 LRRN3E7EW58 273 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 MS4A18H0YCH9 400 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 HPRP00739 348 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 MT-ATP6P00846 226 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 THY1P04216 161 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 HLA-DOBP13765 273 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 NQO1P15559 274 aaKnown RBP6.12□□□□□ -1.43
YBX3-206ENST00000536823 PAX7P23759 505 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 CDKN1AP38936 164 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 LTBQ06643 244 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 PMS2P3Q13401 168 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 PDCD1Q15116 288 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 MS4A18Q3C1V0 323 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 C3orf36Q3SXR2 165 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 C11orf71Q6IPW1 123 aa6.12□□□□□ -1.43
YBX3-206ENST00000536823 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms