RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 ARF3P61204 181 aaPredicted RBP12.75□□□□□ -0.37
LIG1-203ENST00000536218 KIR2DS3Q14952 304 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 MLC1Q15049 377 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 CDPF1Q6NVV7 123 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 C3orf33Q6P1S2 294 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 SLC16A11Q8NCK7 471 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 GAL3ST3Q96A11 431 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 SLAMF9Q96A28 289 aa12.75□□□□□ -0.37
LIG1-203ENST00000536218 CXorf65A6NEN9 183 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 DBX1A6NMT0 343 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 B4DGG1 531 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 PHYHO14832 338 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 SLC31A2O15432 143 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 EMC8O43402 210 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 HOXC4P09017 264 aaPredicted RBP12.74□□□□□ -0.37
LIG1-203ENST00000536218 SFTPCP11686 197 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 ACSM1Q08AH1 577 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 FIGNL1Q6PIW4 674 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 FAM111BQ6SJ93 734 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 TMEM200AQ86VY9 491 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 OR7G2Q8NG99 324 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 OR10R2Q8NGX6 335 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 FLVCR1-AS1Q8TAF5 88 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 ADAMTS15Q8TE58 950 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 ZNF681Q96N22 645 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 ABRACLQ9P1F3 81 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 METTL1Q9UBP6 276 aaKnown RBP12.74□□□□□ -0.37
LIG1-203ENST00000536218 SLC13A4Q9UKG4 626 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 PCDHGA1Q9Y5H4 931 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 SHISA7A6NL88 538 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 RFPL4AA6NLU0 287 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 RFPL4AL1F8VTS6 287 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 TNFRSF10CO14798 259 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 OR8U8P0C7N1 319 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 PYCR1P32322 319 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 NDUFAF6Q330K2 333 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 FAM76BQ5HYJ3 339 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 ZNF311Q5JNZ3 666 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 AADACL4Q5VUY2 407 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 GHSRQ92847 366 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 ARL11Q969Q4 196 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 RERGQ96A58 199 aaPredicted RBP12.74□□□□□ -0.37
LIG1-203ENST00000536218 PIGQQ9BRB3 760 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 EDEM2Q9BV94 578 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 TEX12Q9BXU0 123 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 ADAP2Q9NPF8 381 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 NPFFR2Q9Y5X5 522 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 FANCMQ8IYD8 2048 aa12.74□□□□□ -0.37
LIG1-203ENST00000536218 A0A0D9SG52 128 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 GABARAPH6UMI1 98 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 HCRTR1O43613 425 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 EPPINO95925 133 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 CTSBP07858 339 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 MAPK3P27361 379 aaPredicted RBP12.73□□□□□ -0.37
LIG1-203ENST00000536218 ADH6P28332 368 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 FCRLAQ7L513 359 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 ZNF561Q8N587 486 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 OR56A1Q8NGH5 318 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 OR4Q3Q8NH05 313 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 RNASE11Q8TAA1 199 aaKnown RBP12.73□□□□□ -0.37
LIG1-203ENST00000536218 STOML3Q8TAV4 291 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 ISOC2Q96AB3 205 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 TMPRSS5Q9H3S3 457 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 SMCO4Q9NRQ5 59 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 UQCC1Q9NVA1 299 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 FBXL3Q9UKT7 428 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 NTNG1Q9Y2I2 539 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 GPR55Q9Y2T6 319 aaPredicted RBP12.73□□□□□ -0.37
LIG1-203ENST00000536218 CARHSP1Q9Y2V2 147 aaKnown RBP12.73□□□□□ -0.37
LIG1-203ENST00000536218 TMEM272A0A1B0GTI8 110 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 A0A1W2PRQ8 180 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 CPSF4LA6NMK7 179 aaKnown RBP12.73□□□□□ -0.37
LIG1-203ENST00000536218 PRAMEF26H0Y7S4 382 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 KCNAB3O43448 404 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 B3GALT2O43825 422 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 IGHA1P01876 353 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 GSTM3P21266 225 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 GALP22466 123 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 GPR4P46093 362 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 POU3F4P49335 361 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 YPEL5P62699 121 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 RELQ04864 619 aaPredicted RBP12.73□□□□□ -0.37
LIG1-203ENST00000536218 SRSF5Q13243 272 aaKnown RBP12.73□□□□□ -0.37
LIG1-203ENST00000536218 MAPK14Q16539 360 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 TRMT12Q53H54 448 aaKnown RBP12.73□□□□□ -0.37
LIG1-203ENST00000536218 TMEM69Q5SWH9 247 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 JMJD6Q6NYC1 403 aaPredicted RBP12.73□□□□□ -0.37
LIG1-203ENST00000536218 C1orf94Q6P1W5 598 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 BAIAP2L2Q6UXY1 529 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 OR4K14Q8NGD5 310 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 OR1J4Q8NGS1 313 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 SMPDL3BQ92485 455 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 ARSGQ96EG1 525 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 ZFYVE21Q9BQ24 234 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 NDC1Q9BTX1 674 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 TOLLIPQ9H0E2 274 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 HINT3Q9NQE9 182 aaKnown RBP12.73□□□□□ -0.37
LIG1-203ENST00000536218 CA14Q9ULX7 337 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 TRAV14DV4A0A0A6YYC5 116 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 PRG2P13727 222 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms