RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 LYNX1P0DP58 116 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 NQO1P15559 274 aaKnown RBP9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 EGR1P18146 543 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 ADRA2CP18825 462 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 CPT2P23786 658 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 SLC6A2P23975 617 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 LSP1P33241 339 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 RAD52P43351 418 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 PTDSS1P48651 473 aaKnown RBP9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 CSNK1A1P48729 337 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 SEC24CP53992 1094 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 RGS8P57771 180 aaPredicted RBP9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 GALK2Q01415 458 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 TEKQ02763 1124 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 CAMK2DQ13557 499 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 C10orf128Q5T292 105 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 ACSM5Q6NUN0 579 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 SLC2A7Q6PXP3 512 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 C12orf54Q6X4T0 127 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 LRP11Q86VZ4 500 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 CARM1Q86X55 608 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 OR6N1Q8NGY5 312 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 NMD3Q96D46 503 aaKnown RBP9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 WFDC6Q9BQY6 131 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 IKZF5Q9H5V7 419 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 HINT3Q9NQE9 182 aaKnown RBP9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 SELENONQ9NZV5 590 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 MYEF2Q9P2K5 600 aaKnown RBP9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 CGGBP1Q9UFW8 167 aaPredicted RBP9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 KLHL21Q9UJP4 597 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 PCDHB10Q9UN67 800 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 USH1CQ9Y6N9 552 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 TGP01266 2768 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 WNT9BO14905 357 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 DHHO43323 396 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 SPRY1O43609 319 aaPredicted RBP9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 FARS2O95363 451 aaKnown RBP9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 THY1P04216 161 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 CD79AP11912 226 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 LIPAP38571 399 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 ALDH3B1P43353 468 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 AQP5P55064 265 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 UCP2P55851 309 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 KLF3P57682 345 aaPredicted RBP9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 SELENOVP59797 346 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 SCARB2Q14108 478 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 RAB39AQ14964 217 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 DUSP7Q16829 419 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 RUNDC3AQ59EK9 446 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 PAGE3Q5JUK9 113 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 PRR31Q5SQ13 230 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 NXNQ6DKJ4 435 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 RGS7BPQ6MZT1 257 aaPredicted RBP9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 SLC35D2Q76EJ3 337 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 PTOV1Q86YD1 416 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 ARMC8Q8IUR7 673 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 SLC30A8Q8IWU4 369 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 SYT14Q8NB59 555 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 SLC30A7Q8NEW0 376 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 OR1J2Q8NGS2 313 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 NFKBIDQ8NI38 313 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 FGFBP3Q8TAT2 258 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 MGARPQ8TDB4 240 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 ZNF566Q969W8 418 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 RAB39BQ96DA2 213 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 SPDL1Q96EA4 605 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 LRRC37BQ96QE4 947 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 TMPRSS13Q9BYE2 586 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 POLR2J2Q9GZM3 115 aaKnown RBP9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 POLR2J3Q9H1A7 115 aaKnown RBP9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 TPK1Q9H3S4 243 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 METTL17Q9H7H0 456 aaPredicted RBP9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 MED4Q9NPJ6 270 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 TRIM33Q9UPN9 1127 aa9.56□□□□□ -0.88
CLSTN3-206ENST00000535668 A0A0G2JMP0 313 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 A0A0X1KG70 313 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 EVPLLA8MZ36 301 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 TRIM77I1YAP6 450 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 SEC14L2O76054 403 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 AVPP01185 164 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 IGHV2-5P01817 119 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 CD55P08174 381 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 ADORA3P0DMS8 318 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 TUBG1P23258 451 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 CAPZA2P47755 286 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 MMP15P51511 669 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 BIDP55957 195 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 NCALDP61601 193 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 MRPS34P82930 218 aaKnown RBP9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 PIGFQ07326 219 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 CCNIQ14094 377 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 NPTX1Q15818 432 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 OCLNQ16625 522 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 SLC36A2Q495M3 483 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 GKAP1Q5VSY0 366 aaPredicted RBP9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 MBNL2Q5VZF2 373 aaKnown RBP9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 CCDC80Q76M96 950 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 HDDC2Q7Z4H3 204 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 C11orf65Q8NCR3 313 aa9.55□□□□□ -0.88
CLSTN3-206ENST00000535668 OR4M2Q8NGB6 313 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms