RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 RUNDC3AQ59EK9 446 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 BEND6Q5SZJ8 279 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 ZNF627Q7L945 461 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 PEG10Q86TG7 708 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 ZCCHC24Q8N2G6 241 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 SYNPRQ8TBG9 265 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 ZNF418Q8TF45 676 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 TSPEARQ8WU66 669 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 RAB39BQ96DA2 213 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 ZNF837Q96EG3 531 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 MS4A3Q96HJ5 214 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 JMJD8Q96S16 334 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 CGREF1Q99674 301 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 ARHGDIGQ99819 225 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 ECSITQ9BQ95 431 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 CPPED1Q9BRF8 314 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 NARFLQ9H6Q4 476 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 ALPK2Q86TB3 2170 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 COL6A5A8TX70 2615 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 HMGB1P1B2RPK0 211 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 DHHO43323 396 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 HPRP00739 348 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 QDPRP09417 244 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 ZNF14P17017 642 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 CCNOP22674 350 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 ALDH3B1P43353 468 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 MRPS11P82912 194 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 ZP4Q12836 540 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 TAF11Q15544 211 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 ZNF74Q16587 644 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 KRTAP24-1Q3LI83 254 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 NRN1LQ496H8 165 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 FAM209AQ5JX71 171 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 PHYHD1Q5SRE7 291 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 C12orf54Q6X4T0 127 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 FUNDC1Q8IVP5 155 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 MSRB3Q8IXL7 192 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 ALDH16A1Q8IZ83 802 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 RBM15BQ8NDT2 890 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 MAGEB18Q96M61 343 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 POLR2J2Q9GZM3 115 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 POLR2J3Q9H1A7 115 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 TMEM38BQ9NVV0 291 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 B3GNT2Q9NY97 397 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 TAAR3PQ9P1P4 343 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 SH3GLB1Q9Y371 365 aa11.41□□□□□ -0.58
CLSTN3-205ENST00000535452 A0A0A6YYJ9 748 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 A0A0G2JND7 137 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 CENPBD1B2RD01 187 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 LRRN3E7EW58 273 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 LILRA1O75019 489 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 FAM157BP0CG42 384 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 TROVE2P10155 538 aaKnown RBP eCLIP11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 ZNF35P13682 527 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 PCGF2P35227 344 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 MYBPC1Q00872 1141 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 SLC3A1Q07837 685 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 MELKQ14680 651 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 HFEQ30201 348 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 ZMAT1Q5H9K5 638 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 METTL21CQ5VZV1 264 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 ERICH5Q6P6B1 374 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 ARL9Q6T311 187 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 MYPOPQ86VE0 399 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 SKA3Q8IX90 412 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 C1orf174Q8IYL3 243 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 DPP10Q8N608 796 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 PCYOX1LQ8NBM8 494 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 OR4K5Q8NGD3 323 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 OR6T1Q8NGN1 323 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 OR10A6Q8NH74 314 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 ZNF519Q8TB69 540 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 FNDC8Q8TC99 324 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 STON2Q8WXE9 905 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 LZICQ8WZA0 190 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 TMEM186Q96B77 213 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 EGLN1Q9GZT9 426 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 OR51B6Q9H340 312 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 HINT3Q9NQE9 182 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 FZR1Q9UM11 496 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 MED31Q9Y3C7 131 aa11.4□□□□□ -0.58
CLSTN3-205ENST00000535452 TRAV20A0A0B4J274 112 aa11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 CLDN25C9JDP6 229 aa11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 MSMBP08118 114 aa11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 NAT2P11245 290 aa11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 HOXB9P17482 250 aaPredicted RBP11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 RBM34P42696 430 aaKnown RBP11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 ARHGDIAP52565 204 aa11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 ACTG1P63261 375 aa11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 CD47Q08722 323 aa11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 RIN1Q13671 783 aa11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 DUSP7Q16829 419 aa11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 VMACQ2NL98 169 aa11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 FAHD2BQ6P2I3 314 aaPredicted RBP11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 DEF8Q6ZN54 512 aa11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 HDXQ7Z353 690 aa11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 RAB1CQ92928 201 aa11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 TMEM54Q969K7 222 aa11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 SGTBQ96EQ0 304 aa11.39□□□□□ -0.59
CLSTN3-205ENST00000535452 FAHD2AQ96GK7 314 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms