RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	CLDN6	P56747	220 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	TEK	Q02763	1124 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532		Q6ZTK2	550 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	SUN5	Q8TC36	379 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	ZBTB8A	Q96BR9	441 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	NRIP3	Q9NQ35	241 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	MYO10	Q9HD67	2058 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	VIRMA	Q69YN4	1812 aa	Known RBP	14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	FRG2C	A6NGY1	282 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	KITLG	P21583	273 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	C21orf33	P30042	268 aa	Predicted RBP	14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	ZNF136	P52737	540 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	DUSP2	Q05923	314 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	HYAL4	Q2M3T9	481 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	KHDC1L	Q5JSQ8	128 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	BPIFB2	Q8N4F0	458 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	OR5T1	Q8NG75	326 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	CFHR5	Q9BXR6	569 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	UBQLN3	Q9H347	655 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	ACKR4	Q9NPB9	350 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	KIF25	Q9UIL4	384 aa		14.42	□□□□□ -0.1
NCAPD3-213	ENST00000534532	ARPC1B	O15143	372 aa	Known RBP	14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	NFYB	P25208	207 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	PDLIM3	Q53GG5	364 aa	Predicted RBP	14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	PAN3	Q58A45	887 aa	Known RBP	14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	NKAIN3	Q8N8D7	197 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	FAM71C	Q8NEG0	241 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	TMEM185A	Q8NFB2	350 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	OR4A16	Q8NH70	328 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	GHSR	Q92847	366 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	POLDIP2	Q9Y2S7	368 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	ZNF195	O14628	629 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	LGI1	O95970	557 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	POU2F2	P09086	479 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	TBXA2R	P21731	343 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	CAMK2B	Q13554	666 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	GALE	Q14376	348 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	OR1C1	Q15619	314 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	UBE2NL	Q5JXB2	153 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	PIGT	Q969N2	578 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	C20orf27	Q9GZN8	174 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532		A0A1B0GV50	99 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	OLIG3	Q7RTU3	272 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	FGGY	Q96C11	551 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	SPACA9	Q96E40	222 aa	Predicted RBP	14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	OXGR1	Q96P68	337 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	FAM173A	Q9BQD7	235 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	P4HTM	Q9NXG6	502 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	MYH15	Q9Y2K3	1946 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	ZNF705E	A8MWA4	302 aa	Predicted RBP	14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	DEGS1	O15121	323 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	GABRA5	P31644	462 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	TNK1	Q13470	666 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	ZNF628	Q5EBL2	1059 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	FCRL6	Q6DN72	434 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	DOK3	Q7L591	496 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	OR5AS1	Q8N127	324 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	KCTD12	Q96CX2	325 aa	Known RBP	14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	SSC5D	A1L4H1	1573 aa		14.41	□□□□□ -0.1
NCAPD3-213	ENST00000534532	PTTG1	O95997	202 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	RFC3	P40938	356 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	DUSP8	Q13202	625 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	THEM4	Q5T1C6	240 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	CD300LG	Q6UXG3	332 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	KISS1R	Q969F8	398 aa	Predicted RBP	14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	ZNF649	Q9BS31	505 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	AMBRA1	Q9C0C7	1298 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	TSPAN15	O95858	294 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	EMP3	P54852	163 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	NXPH1	P58417	271 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	B3GLCT	Q6Y288	498 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	TP53I13	Q8NBR0	393 aa	Predicted RBP	14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	NT5C	Q8TCD5	201 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	MAFIP	Q8WZ33	124 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	PRDM4	Q9UKN5	801 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	ALPL	P05186	524 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	HOXA1	P49639	335 aa	Predicted RBP	14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	RAB4B	P61018	213 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	FZD2	Q14332	565 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	XKR7	Q5GH72	579 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	WDR88	Q6ZMY6	472 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	SPACA1	Q9HBV2	294 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	SEMA4G	Q9NTN9	838 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	GM2A	P17900	193 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	DAP	P51397	102 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	SUMO3	P55854	103 aa	Predicted RBP	14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	EMX1	Q04741	257 aa	Predicted RBP	14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	ANKRD13B	Q86YJ7	626 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	NAXD	Q8IW45	347 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	SECTM1	Q8WVN6	248 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	B3GALT5	Q9Y2C3	310 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	TRGV5	A0A0B4J1U4	118 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	ATF4	P18848	351 aa	Predicted RBP	14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	AGFG1	P52594	562 aa	Known RBP	14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	YIF1B	Q5BJH7	314 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	ZNF766	Q5HY98	468 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	EMC4	Q5J8M3	183 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532	HES3	Q5TGS1	186 aa		14.4	□□□□□ -0.1
NCAPD3-213	ENST00000534532		Q6ZPB1	254 aa	Predicted RBP	14.4	□□□□□ -0.1

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms