RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 XKRYO14609 159 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 OR10H3O60404 316 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 TRMUO75648 421 aaKnown RBP11.67□□□□□ -0.54
CAPN1-227ENST00000533909 UBL3O95164 117 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 HLA-HP01893 362 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 OR8G3PP0DMU2 310 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 CBR1P16152 277 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 IDH3GP51553 393 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-227ENST00000533909 RAP1BP61224 184 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 RPL27P61353 136 aaKnown RBP11.67□□□□□ -0.54
CAPN1-227ENST00000533909 RAP1AP62834 184 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 CHRNB3Q05901 458 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 PIGFQ07326 219 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 ZBED5Q49AG3 693 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 FAM98BQ52LJ0 330 aaKnown RBP11.67□□□□□ -0.54
CAPN1-227ENST00000533909 LCN8Q6JVE9 175 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 TSEN54Q7Z6J9 526 aaKnown RBP11.67□□□□□ -0.54
CAPN1-227ENST00000533909 MDP1Q86V88 176 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 LURAP1LQ8IV03 231 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 WDFY1Q8IWB7 410 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 LRRC75A-AS1Q8N1F1 130 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 SLC22A24Q8N4F4 322 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 FAM169BQ8N8A8 192 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 FNDC8Q8TC99 324 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 MCHR2Q969V1 340 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 ASB9Q96DX5 294 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 TRMT61AQ96FX7 289 aaKnown RBP11.67□□□□□ -0.54
CAPN1-227ENST00000533909 RSRC1Q96IZ7 334 aaKnown RBP11.67□□□□□ -0.54
CAPN1-227ENST00000533909 RBP7Q96R05 134 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 DHRS9Q9BPW9 319 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 KATNB1Q9BVA0 655 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 KCNN2Q9H2S1 579 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 NELFAQ9H3P2 528 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 FBXL3Q9UKT7 428 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 MOKQ9UQ07 419 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 HEATR1Q9H583 2144 aaKnown RBP11.66□□□□□ -0.54
CAPN1-227ENST00000533909 VSTM5A8MXK1 200 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 CDC42EP2O14613 210 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 KRT36O76013 467 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 NDUFB2O95178 105 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 SEMG1P04279 462 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 SOD3P08294 240 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 TSPAN19P0C672 248 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 CECR9P0C854 216 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 BMP4P12644 408 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 RRM2P31350 389 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 PTDSS1P48651 473 aaKnown RBP11.66□□□□□ -0.54
CAPN1-227ENST00000533909 ATP5J2P56134 94 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 ERVK-25P63136 954 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 RUNX1T1Q06455 604 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 C3orf36Q3SXR2 165 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 Q5PR19 223 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 ARMC4Q5T2S8 1044 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 SHEQ5VZ18 495 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 TMEM53Q6P2H8 277 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 LRFN4Q6PJG9 635 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 CLPTM1LQ96KA5 538 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 DHRS1Q96LJ7 313 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 ALG12Q9BV10 488 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 DENND2DQ9H6A0 471 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-227ENST00000533909 MAGIXQ9H6Y5 334 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 RNF121Q9H920 327 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 TMEM38BQ9NVV0 291 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 ZNF346Q9UL40 294 aaKnown RBP11.66□□□□□ -0.54
CAPN1-227ENST00000533909 MTORP42345 2549 aa11.66□□□□□ -0.54
CAPN1-227ENST00000533909 SH3PXD2BA1X283 911 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 E7EQL1 145 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 TNFRSF11BO00300 401 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 IGKV3-15P01624 115 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 IGHMP01871 453 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 CD14P08571 375 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 TTKP33981 857 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 GIPRP48546 466 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 PTH2RP49190 550 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 RASSF2P50749 326 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 RAB1AP62820 205 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 NAAAQ02083 359 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 SEC23BQ15437 767 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 SLC36A2Q495M3 483 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 THEM4Q5T1C6 240 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 ZNF544Q6NX49 715 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 ZNF627Q7L945 461 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 SLC16A14Q7RTX9 510 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 DPPA2Q7Z7J5 298 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 TGIF2LYQ8IUE0 185 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 MUC15Q8N387 334 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 ARIH2OSQ8N7S6 290 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 IL17RDQ8NFM7 739 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 OR4F15Q8NGB8 312 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 FANK1Q8TC84 345 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 NSMAFQ92636 917 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 ZNF570Q96NI8 536 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 TSPAN32Q96QS1 320 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 BTBD10Q9BSF8 475 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 MRPL13Q9BYD1 178 aaKnown RBP11.65□□□□□ -0.54
CAPN1-227ENST00000533909 GSX2Q9BZM3 304 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 SMURF2Q9HAU4 748 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 CRNNQ9UBG3 495 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-227ENST00000533909 SPEF1Q9Y4P9 236 aa11.65□□□□□ -0.54
CAPN1-227ENST00000533909 USF3Q68DE3 2245 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms