RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 TRIM43Q96BQ3 446 aaPredicted RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 MRPS24Q96EL2 167 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 CASD1Q96PB1 797 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 RHNO1Q9BSD3 238 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 NELFAQ9H3P2 528 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 DAPP1Q9UN19 280 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 TRPM3Q9HCF6 1732 aaPredicted RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 ARFGEF2Q9Y6D5 1785 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 TRBV5-5A0A0J9YX44 114 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 RNF212BA8MTL3 300 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 F7P08709 466 aaPredicted RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 MMP9P14780 707 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 TIMP2P16035 220 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 CCKARP32238 428 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 ZNF239Q16600 458 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 C18orf21Q32NC0 220 aaPredicted RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 FAM109BQ6ICB4 259 aaPredicted RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 TMEM91Q6ZNR0 172 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 MOB1BQ7L9L4 216 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 UBE3DQ7Z6J8 389 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 MORN4Q8NDC4 146 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 PHOSPHO2Q8TCD6 241 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 CMBLQ96DG6 245 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 KIRREL1Q96J84 757 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 TECTBQ96PL2 329 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 GPR173Q9NS66 373 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 PTRH2Q9Y3E5 179 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 DDX60Q8IY21 1712 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 TRBV6-7A0A0A0MS04 114 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 RTCAO00442 366 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 KLF4O43474 513 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 PPP1R3DO95685 299 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 MSR1P21757 451 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 PPICP45877 212 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 SRP9P49458 86 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 ASCL1P50553 236 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 RPS26P62854 115 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 PPIAP62937 165 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 RPS21P63220 83 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 GPR162Q16538 588 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 MICBQ29980 383 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 RNASE12Q5GAN4 147 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 OR10K2Q6IF99 312 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 OTOP2Q7RTS6 562 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 ZNF280BQ86YH2 543 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 OR4K15Q8NH41 348 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 DERL3Q96Q80 235 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 ABHD1Q96SE0 405 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 ENKD1Q9H0I2 346 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 NARFLQ9H6Q4 476 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 ZNF286AQ9HBT8 521 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 TAS2R16Q9NYV7 291 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 FBXL2Q9UKC9 423 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 PCDHGA1Q9Y5H4 931 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 MAST2Q6P0Q8 1798 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 TMEM269A0A1B0GVZ9 245 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 OR5H14A6NHG9 310 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 M0R129 80 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 CTSDP07339 412 aaPredicted RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 CFPP27918 469 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 IL12BP29460 328 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 SDHAP31040 664 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 MC3RP41968 323 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 CDKN1CP49918 316 aaPredicted RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 PGGT1BP53609 377 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 ATP1B3P54709 279 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 UBE2KP61086 200 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 BTN3A2P78410 334 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 SP3Q02447 781 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 IL13RA2Q14627 380 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 AGERQ15109 404 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 JMJD6Q6NYC1 403 aaPredicted RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 LEG1Q6P5S2 330 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 Q6ZRG5 221 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 PARS2Q7L3T8 475 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 HSD11B1LQ7Z5J1 315 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 CSNK1A1LQ8N752 337 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 ZNF709Q8N972 641 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 ZNF610Q8N9Z0 462 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 OR4C16Q8NGL9 310 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 INTS12Q96CB8 462 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 DGAT2Q96PD7 388 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 SDF2Q99470 211 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 NPAS1Q99742 590 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 ORAI3Q9BRQ5 295 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 NMNAT2Q9BZQ4 307 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 KIR3DX1Q9H7L2 352 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 RHOFQ9HBH0 211 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 TMEM30AQ9NV96 361 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 C20orf202A1L168 122 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 ZNF726A6NNF4 738 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 ZNF705EA8MWA4 302 aaPredicted RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 A8MXE2 369 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 SLC33A1O00400 549 aaPredicted RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 FGF16O43320 207 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 HCRTR2O43614 444 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 MTX2O75431 263 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 MPC2O95563 127 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 EIF4EP06730 217 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 NGFRP08138 427 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms