RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 POLR2J3Q9H1A7 115 aaKnown RBP9.03□□□□□ -0.96
CAPN1-225ENST00000533704 OR51B6Q9H340 312 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 PLK3Q9H4B4 646 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 ZNF442Q9H7R0 627 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 RNF121Q9H920 327 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 INIPQ9NRY2 104 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 ZNF224Q9NZL3 707 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 AP3M1Q9Y2T2 418 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 CMAHPQ9Y471 501 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 SPEF1Q9Y4P9 236 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 A0A096LNT2 108 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 A8MV72 311 aaPredicted RBP9.02□□□□□ -0.97
CAPN1-225ENST00000533704 KIAA1324LA8MWY0 1029 aaPredicted RBP9.02□□□□□ -0.97
CAPN1-225ENST00000533704 J3KTA2 159 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 NME4O00746 187 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 TLX2O43763 284 aaPredicted RBP9.02□□□□□ -0.97
CAPN1-225ENST00000533704 CRLF1O75462 422 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 IFNW1P05000 195 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 ERCC1P07992 297 aaPredicted RBP9.02□□□□□ -0.97
CAPN1-225ENST00000533704 ADRA2AP08913 450 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 ZNF14P17017 642 aaPredicted RBP9.02□□□□□ -0.97
CAPN1-225ENST00000533704 USF1P22415 310 aaPredicted RBP9.02□□□□□ -0.97
CAPN1-225ENST00000533704 NR4A1P22736 598 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 GSK3BP49841 420 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 PPOXP50336 477 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 DAP3P51398 398 aaKnown RBP9.02□□□□□ -0.97
CAPN1-225ENST00000533704 ZNF84P51523 738 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 RUNX1T1Q06455 604 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 LOXL1Q08397 574 aaPredicted RBP9.02□□□□□ -0.97
CAPN1-225ENST00000533704 ST3GAL3Q11203 375 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 LAPTM4AQ15012 233 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 IQCCQ4KMZ1 466 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 TMEM53Q6P2H8 277 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 FKBP9P1Q75LS8 142 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 ZNF627Q7L945 461 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 PIWIL3Q7Z3Z3 882 aaKnown RBP9.02□□□□□ -0.97
CAPN1-225ENST00000533704 TREML1Q86YW5 311 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 CDK20Q8IZL9 346 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 NOXO1Q8NFA2 376 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 OR4K5Q8NGD3 323 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 FGFBP3Q8TAT2 258 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 ASB10Q8WXI3 467 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 FAM162AQ96A26 154 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 PRRC1Q96M27 445 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 SYT3Q9BQG1 590 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 FNDC11Q9BVV2 318 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 TPK1Q9H3S4 243 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 EFCAB1Q9HAE3 211 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 TMEM38BQ9NVV0 291 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 FZR1Q9UM11 496 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 A4GNTQ9UNA3 340 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 SNX13Q9Y5W8 968 aa9.02□□□□□ -0.97
CAPN1-225ENST00000533704 ENTPD5O75356 428 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 TRMUO75648 421 aaKnown RBP9.01□□□□□ -0.97
CAPN1-225ENST00000533704 SLC2A10O95528 541 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 SERPINA1P01009 418 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 FAM157BP0CG42 384 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 SAGP10523 405 aaPredicted RBP9.01□□□□□ -0.97
CAPN1-225ENST00000533704 THRBP10828 461 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 CCL2P13500 99 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 ACADSP16219 412 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 NCK1P16333 377 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 ZNF16P17020 682 aaPredicted RBP9.01□□□□□ -0.97
CAPN1-225ENST00000533704 FUT4P22083 530 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 SEC24CP53992 1094 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 LSM11P83369 360 aaKnown RBP eCLIP9.01□□□□□ -0.97
CAPN1-225ENST00000533704 CD47Q08722 323 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 IFI44LQ53G44 452 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 SLC16A14Q7RTX9 510 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 HDDC2Q7Z4H3 204 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 IGFN1Q86VF2 1251 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 NRMQ8IXM6 262 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 LRRC18Q8N456 261 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 GEMIN6Q8WXD5 167 aaKnown RBP9.01□□□□□ -0.97
CAPN1-225ENST00000533704 NSMAFQ92636 917 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 MCHR2Q969V1 340 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 BPIFA2Q96DR5 249 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 HSH2DQ96JZ2 352 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 ZNF75AQ96N20 296 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 FOXN4Q96NZ1 517 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 DOK1Q99704 481 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 HOPXQ9BPY8 73 aaPredicted RBP9.01□□□□□ -0.97
CAPN1-225ENST00000533704 KCTD14Q9BQ13 255 aaPredicted RBP9.01□□□□□ -0.97
CAPN1-225ENST00000533704 MRPL37Q9BZE1 423 aaKnown RBP9.01□□□□□ -0.97
CAPN1-225ENST00000533704 CDH20Q9HBT6 801 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 DUSP13Q9UII6 198 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 ADAM21Q9UKJ8 722 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 FBXL3Q9UKT7 428 aa9.01□□□□□ -0.97
CAPN1-225ENST00000533704 ATRQ13535 2644 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 TRAV27A0A087WT01 109 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 A0A1W2PPW3 197 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 LOC390937A0A1W2PQ73 354 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 TMEM129A0AVI4 362 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 NDUFS8O00217 210 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 SERPINA5P05154 406 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 ZNF35P13682 527 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 APEHP13798 732 aaKnown RBP9□□□□□ -0.97
CAPN1-225ENST00000533704 DAOP14920 347 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 TCN1P20061 433 aaPredicted RBP9□□□□□ -0.97
CAPN1-225ENST00000533704 MAKP20794 623 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms