RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 PRO1933Q9H354 126 aa11.24□□□□□ -0.61
BDNF-218ENST00000533246 METTL17Q9H7H0 456 aaPredicted RBP11.24□□□□□ -0.61
BDNF-218ENST00000533246 SLC6A20Q9NP91 592 aa11.24□□□□□ -0.61
BDNF-218ENST00000533246 RBFOX1Q9NWB1 397 aaKnown RBP11.24□□□□□ -0.61
BDNF-218ENST00000533246 ZFC3H1O60293 1989 aaKnown RBP11.24□□□□□ -0.61
BDNF-218ENST00000533246 NTN1O95631 604 aa11.24□□□□□ -0.61
BDNF-218ENST00000533246 DCNP07585 359 aaKnown RBP11.24□□□□□ -0.61
BDNF-218ENST00000533246 CD1CP29017 333 aa11.24□□□□□ -0.61
BDNF-218ENST00000533246 AKR1C2P52895 323 aa11.24□□□□□ -0.61
BDNF-218ENST00000533246 HERV-K104P61576 105 aa11.24□□□□□ -0.61
BDNF-218ENST00000533246 VAMP2P63027 116 aa11.24□□□□□ -0.61
BDNF-218ENST00000533246 AKR1C1Q04828 323 aa11.24□□□□□ -0.61
BDNF-218ENST00000533246 FAM174AQ8TBP5 190 aa11.24□□□□□ -0.61
BDNF-218ENST00000533246 STK35Q8TDR2 534 aa11.24□□□□□ -0.61
BDNF-218ENST00000533246 FOXQ1Q9C009 403 aa11.24□□□□□ -0.61
BDNF-218ENST00000533246 ZNF442Q9H7R0 627 aa11.24□□□□□ -0.61
BDNF-218ENST00000533246 NOX3Q9HBY0 568 aa11.24□□□□□ -0.61
BDNF-218ENST00000533246 GREM1O60565 184 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 P04436 131 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 HIST1H1CP16403 213 aaKnown RBP11.23□□□□□ -0.61
BDNF-218ENST00000533246 RAB4AP20338 218 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 GDNFP39905 211 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 SNRPGP62308 76 aaKnown RBP11.23□□□□□ -0.61
BDNF-218ENST00000533246 FABP5Q01469 135 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 DLX2Q07687 328 aaPredicted RBP11.23□□□□□ -0.61
BDNF-218ENST00000533246 EIF4EBP2Q13542 120 aaPredicted RBP11.23□□□□□ -0.61
BDNF-218ENST00000533246 AADACL4Q5VUY2 407 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 ZNF620Q6ZNG0 422 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 GPR32P1Q8NGA4 272 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 ADAMTS18Q8TE60 1221 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 DVL3Q92997 716 aaPredicted RBP11.23□□□□□ -0.61
BDNF-218ENST00000533246 TSLPQ969D9 159 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 PNPLA2Q96AD5 504 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 SFXN2Q96NB2 322 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 PLA2G2FQ9BZM2 168 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 SLC38A1Q9H2H9 487 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 HHLA2Q9UM44 414 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 ZNF281Q9Y2X9 895 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 KCNE1BA0A087WTH5 132 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 ZNF736B4DX44 427 aaPredicted RBP11.23□□□□□ -0.61
BDNF-218ENST00000533246 ZNF25P17030 456 aaPredicted RBP11.23□□□□□ -0.61
BDNF-218ENST00000533246 CRABP1P29762 137 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 OR10A3P58181 314 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 CLLU1Q5K131 121 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 NDUFAF7Q7L592 441 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 ELP5Q8TE02 316 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 THRSPQ92748 146 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 SEC22AQ96IW7 307 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 TMEM68Q96MH6 324 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 PTDSS2Q9BVG9 487 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 SEMA6CQ9H3T2 930 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 ISG20L2Q9H9L3 353 aaKnown RBP11.23□□□□□ -0.61
BDNF-218ENST00000533246 C19orf53Q9UNZ5 99 aaPredicted RBP11.23□□□□□ -0.61
BDNF-218ENST00000533246 MED12Q93074 2177 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 PIKFYVEQ9Y2I7 2098 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 THSD7AQ9UPZ6 1657 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 ACOT7O00154 380 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 NUDT21O43809 227 aaKnown RBP11.23□□□□□ -0.61
BDNF-218ENST00000533246 OR2T7P0C7T2 308 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 GLP1RP43220 463 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 LTBQ06643 244 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 LIPNQ5VXI9 398 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 GLCCI1Q86VQ1 547 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 CLDN22Q8N7P3 220 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 PLPP7Q8NBV4 271 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 OR5M1Q8NGP8 315 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 OR2T27Q8NH04 317 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 GCDHQ92947 438 aaPredicted RBP11.23□□□□□ -0.61
BDNF-218ENST00000533246 RSPRY1Q96DX4 576 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 OR6C1Q96RD1 312 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 GABARAPL3Q9BY60 117 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 OR11A1Q9GZK7 315 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 ZNF160Q9HCG1 818 aa11.23□□□□□ -0.61
BDNF-218ENST00000533246 GPR55Q9Y2T6 319 aaPredicted RBP11.23□□□□□ -0.61
BDNF-218ENST00000533246 SYPP08247 313 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 CD14P08571 375 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 UGT2B10P36537 528 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 SLC6A8P48029 635 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 PLP2Q04941 152 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 SRSF5Q13243 272 aaKnown RBP11.22□□□□□ -0.61
BDNF-218ENST00000533246 SIAH3Q8IW03 269 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 GPR137CQ8N3F9 429 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 BRIX1Q8TDN6 353 aaKnown RBP11.22□□□□□ -0.61
BDNF-218ENST00000533246 RHBDD1Q8TEB9 315 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 NKX3-1Q99801 234 aaPredicted RBP11.22□□□□□ -0.61
BDNF-218ENST00000533246 SLC6A14Q9UN76 642 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 SUSD5O60279 629 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 RAB5CP51148 216 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 CBFBQ13951 182 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 HBMQ6B0K9 141 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 RPL22L1Q6P5R6 122 aaKnown RBP11.22□□□□□ -0.61
BDNF-218ENST00000533246 ADGRF3Q8IZF5 1079 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 LRRC18Q8N456 261 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 HOXB13Q92826 284 aaPredicted RBP11.22□□□□□ -0.61
BDNF-218ENST00000533246 ACKR4Q9NPB9 350 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 DUSP22Q9NRW4 184 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 FBXO34Q9NWN3 711 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 SUSD2Q9UGT4 822 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 M0R082 166 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 AGPAT2O15120 278 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms