RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	ZNF418	Q8TF45	676 aa	Predicted RBP	13.34	□□□□□ -0.27
TM9SF1-209	ENST00000530468	SNX33	Q8WV41	574 aa		13.34	□□□□□ -0.27
TM9SF1-209	ENST00000530468	LRRC37B	Q96QE4	947 aa		13.34	□□□□□ -0.27
TM9SF1-209	ENST00000530468	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.34	□□□□□ -0.27
TM9SF1-209	ENST00000530468	CDH20	Q9HBT6	801 aa		13.34	□□□□□ -0.27
TM9SF1-209	ENST00000530468	LPAR2	Q9HBW0	351 aa		13.34	□□□□□ -0.27
TM9SF1-209	ENST00000530468	NANS	Q9NR45	359 aa		13.34	□□□□□ -0.27
TM9SF1-209	ENST00000530468	TMEM38B	Q9NVV0	291 aa		13.34	□□□□□ -0.27
TM9SF1-209	ENST00000530468	SLCO1C1	Q9NYB5	712 aa		13.34	□□□□□ -0.27
TM9SF1-209	ENST00000530468	TAAR3P	Q9P1P4	343 aa		13.34	□□□□□ -0.27
TM9SF1-209	ENST00000530468	NBEAL1	Q6ZS30	2694 aa		13.34	□□□□□ -0.27
TM9SF1-209	ENST00000530468	IGLV3-9	A0A075B6K5	115 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	C17orf100	A8MU93	164 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468		M0R3H8	397 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	WNT9B	O14905	357 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	DHH	O43323	396 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	SNAP29	O95721	258 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	VIM	P08670	466 aa	Known RBP	13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	CFP	P27918	469 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	LMO4	P61968	165 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	MYBPC1	Q00872	1141 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	TEK	Q02763	1124 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	TBC1D28	Q2M2D7	210 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	AGK	Q53H12	422 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	TMEM154	Q6P9G4	183 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	TTC33	Q6PID6	262 aa	Predicted RBP	13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	LRFN4	Q6PJG9	635 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	OR1J2	Q8NGS2	313 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	SYNPR	Q8TBG9	265 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	EBF4	Q9BQW3	602 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	SLC19A3	Q9BZV2	496 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	RNF121	Q9H920	327 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	HINT3	Q9NQE9	182 aa	Known RBP	13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	NKIRAS2	Q9NYR9	191 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	TAS2R5	Q9NYW4	299 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	ZNF229	Q9UJW7	825 aa		13.33	□□□□□ -0.28
TM9SF1-209	ENST00000530468	CPSF4L	A6NMK7	179 aa	Known RBP	13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	MGRN1	O60291	552 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	ERLIN1	O75477	346 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	CH25H	O95992	272 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	PNP	P00491	289 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	IGHG1	P01857	330 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	HIST1H2AB	P04908	130 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	FAM157B	P0CG42	384 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	PGA4	P0DJD7	388 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	PGA3	P0DJD8	388 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	ZNF250	P15622	560 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	RAD52	P43351	418 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	MAGEB1	P43366	347 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	RUNX1T1	Q06455	604 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	MOG	Q16653	247 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	DUSP7	Q16829	419 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	CYP51A1	Q16850	503 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	SLC36A2	Q495M3	483 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	RUNDC3A	Q59EK9	446 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	ENTPD8	Q5MY95	495 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	DLEU7	Q6UYE1	221 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	USP43	Q70EL4	1123 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	HIST3H2A	Q7L7L0	130 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	PTOV1	Q86YD1	416 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	OR6T1	Q8NGN1	323 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	ZNF519	Q8TB69	540 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	LRRC8C	Q8TDW0	803 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	ADAMTS16	Q8TE57	1224 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	C11orf40	Q8WZ69	217 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	HIST1H2AC	Q93077	130 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	MPP4	Q96JB8	637 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	SH3GL3	Q99963	347 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	BCL2L14	Q9BZR8	327 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	LRMDA	Q9H2I8	198 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	RABEP2	Q9H5N1	569 aa		13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	LEF1	Q9UJU2	399 aa	Predicted RBP	13.32	□□□□□ -0.28
TM9SF1-209	ENST00000530468	IQCM	A0A1B0GVH7	501 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	TRAPPC13	A5PLN9	417 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468		M0QX08	132 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	BCL10	O95999	233 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	CLPTM1	O96005	669 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	MT-ND5	P03915	603 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	LCK	P06239	509 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	QDPR	P09417	244 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	ASAH2B	P0C7U1	165 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	ZNF84	P51523	738 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	CLRN1	P58418	232 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	ACTG1	P63261	375 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	PLP2	Q04941	152 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	MELK	Q14680	651 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	NPTX1	Q15818	432 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	ALKBH6	Q3KRA9	238 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	ACSM5	Q6NUN0	579 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	SLC16A14	Q7RTX9	510 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	HDDC2	Q7Z4H3	204 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	SLC30A8	Q8IWU4	369 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	GPR32P1	Q8NGA4	272 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	OR4K5	Q8NGD3	323 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	RAB39B	Q96DA2	213 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	FAHD2A	Q96GK7	314 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	ZNF426	Q9BUY5	554 aa		13.31	□□□□□ -0.28
TM9SF1-209	ENST00000530468	PCDHAC1	Q9H158	963 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms