RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 ACVR1BP36896 505 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 RASSF2P50749 326 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 ART1P52961 327 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 TOP3AQ13472 1001 aaPredicted RBP11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 DEFB113Q30KQ7 82 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 C3orf36Q3SXR2 165 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 FAM205BPQ63HN1 556 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 AQP12AQ8IXF9 295 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 SYT14Q8NB59 555 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 NOXO1Q8NFA2 376 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 IGFBPL1Q8WX77 278 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 PIGTQ969N2 578 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 NMD3Q96D46 503 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 RSRC1Q96IZ7 334 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 TSPAN32Q96QS1 320 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 KCNK17Q96T54 332 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 CADM1Q9BY67 442 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 TRIM15Q9C019 465 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 CXXC4Q9H2H0 198 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 BEX4Q9NWD9 120 aaPredicted RBP11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 B3GNT2Q9NY97 397 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 CISD1Q9NZ45 108 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 LYVE1Q9Y5Y7 322 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 ZNF503-AS2A6NEH8 195 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 UNC119BA6NIH7 251 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 A6NIZ1 184 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 TNFRSF11BO00300 401 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 OR10H3O60404 316 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 NDUFB2O95178 105 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 IGKV3-15P01624 115 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 IGLV1-44P01699 117 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 RAP2AP10114 183 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 B4GALT1P15291 398 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 RPL4P36578 427 aaKnown RBP11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 IFNGR2P38484 337 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 RAP1BP61224 184 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 RAP1AP62834 184 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 ERVK-25P63136 954 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 MYBPC1Q00872 1141 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 SPOCK1Q08629 439 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 C10orf128Q5T292 105 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 C1orf94Q6P1W5 598 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 SLC22A25Q6T423 547 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 MDP1Q86V88 176 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 ADGRG5Q8IZF4 528 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 DEPDC4Q8N2C3 294 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 ARIH2OSQ8N7S6 290 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 OR4C15Q8NGM1 316 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 ZNF519Q8TB69 540 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 FBXW5Q969U6 566 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 SLC38A2Q96QD8 506 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 CCL19Q99731 98 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 ALG12Q9BV10 488 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 KATNB1Q9BVA0 655 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 NDEL1Q9GZM8 345 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 TMEM38BQ9NVV0 291 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 POMPQ9Y244 141 aa11.04□□□□□ -0.64
CCDC90B-216ENST00000529856 E7EQL1 145 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 ARHGEF9O43307 516 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 HLA-HP01893 362 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 CECR9P0C854 216 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 DANCRP0C864 163 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 OR8G3PP0DMU2 310 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 FPR3P25089 353 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 ARR3P36575 388 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 CAPZA2P47755 286 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 GSSP48637 474 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 ZNF84P51523 738 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 CDH11P55287 796 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 FXYD6P3P58550 94 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 NRN1LQ496H8 165 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 THEM4Q5T1C6 240 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 OR2T5Q6IEZ7 315 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 PGBD2Q6P3X8 592 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 SLC25A47Q6Q0C1 308 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 THSD4Q6ZMP0 1018 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 DPY19L2P2Q6ZN68 376 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 FAM122BQ7Z309 247 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 SKA3Q8IX90 412 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 SLC22A24Q8N4F4 322 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 LINC00471Q8N535 108 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 OR2T29Q8NH02 315 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 FNDC8Q8TC99 324 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 GNPDA2Q8TDQ7 276 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 SMAP2Q8WU79 429 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 Q96M85 177 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 ZNF75AQ96N20 296 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 RBP7Q96R05 134 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 GPX7Q96SL4 187 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 CHID1Q9BWS9 393 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 DENND2DQ9H6A0 471 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 SMURF2Q9HAU4 748 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 NRIP3Q9NQ35 241 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 ZNF224Q9NZL3 707 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 GRHPRQ9UBQ7 328 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 SLC7A8Q9UHI5 535 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 MOKQ9UQ07 419 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 ADAM18Q9Y3Q7 739 aa11.03□□□□□ -0.64
CCDC90B-216ENST00000529856 PRRC2AP48634 2157 aaKnown RBP11.02□□□□□ -0.65
CCDC90B-216ENST00000529856 IGKV1D-43A0A0B4J1Z2 117 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms