RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 ZYG11AQ6WRX3 759 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 COMTD1Q86VU5 262 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 STX12Q86Y82 276 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 DNAAF3Q8N9W5 541 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 CCDC112Q8NEF3 446 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 ENKURQ8TC29 256 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 MAGEE2Q8TD90 523 aaPredicted RBP2.72□□□□□ -1.97
CTR9-204ENST00000529355 ACOT11Q8WXI4 607 aaPredicted RBP2.72□□□□□ -1.97
CTR9-204ENST00000529355 SHC3Q92529 594 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 FGF14Q92915 247 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 TM4SF19Q96DZ7 209 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 MIA2Q96PC5 1412 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 CLCC1Q96S66 551 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 TSC22D3Q99576 134 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 NPAS2Q99743 824 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 RIOK2Q9BVS4 552 aaKnown RBP2.72□□□□□ -1.97
CTR9-204ENST00000529355 TPK1Q9H3S4 243 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 XKR8Q9H6D3 395 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 HAUS4Q9H6D7 363 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 GORASP2Q9H8Y8 452 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 NHEJ1Q9H9Q4 299 aaPredicted RBP2.72□□□□□ -1.97
CTR9-204ENST00000529355 UCK1Q9HA47 277 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 DDX18Q9NVP1 670 aaKnown RBP2.72□□□□□ -1.97
CTR9-204ENST00000529355 NUFIP1Q9UHK0 495 aaKnown RBP2.72□□□□□ -1.97
CTR9-204ENST00000529355 YEATS2Q9ULM3 1422 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 CFL2Q9Y281 166 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 CBY1Q9Y3M2 126 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 CHTOPQ9Y3Y2 248 aaKnown RBP2.72□□□□□ -1.97
CTR9-204ENST00000529355 F11RQ9Y624 299 aaKnown RBP2.72□□□□□ -1.97
CTR9-204ENST00000529355 BZW2Q9Y6E2 419 aaKnown RBP2.72□□□□□ -1.97
CTR9-204ENST00000529355 SBNO1A3KN83 1393 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 MTUS2Q5JR59 1369 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 NACADO15069 1562 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 NPATQ14207 1427 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 GOLGA8QA0A0J9YX86 632 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 GOLGA8OA6NCC3 632 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 GOLGA8NF8WBI6 632 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 GOLGA8RI6L899 631 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 KMOO15229 486 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 ZW10O43264 779 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 ALDOBP05062 364 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 POU2F1P14859 743 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 HPGDP15428 266 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 CBX5P45973 191 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 HSPA13P48723 471 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 VBP1P61758 197 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 CCNA1P78396 465 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 GBE1Q04446 702 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 IFFO1Q0D2I5 559 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 ASPHQ12797 758 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 SLAQ13239 276 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 CYTH1Q15438 398 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 TSC22D1Q15714 1073 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 BCL2A1Q16548 175 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 WHAMMP3Q1A5X7 153 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 TMEM183BQ1AE95 376 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 FBXO48Q5FWF7 155 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 LRRC31Q6UY01 552 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 C6orf120Q7Z4R8 191 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 LINC01551Q86U37 167 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 TRIM69Q86WT6 500 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 TMEM183AQ8IXX5 376 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 TPRX1Q8N7U7 411 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 CEP112Q8N8E3 955 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 OR5D13Q8NGL4 314 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 SLC22A8Q8TCC7 542 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 DDI1Q8WTU0 396 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 PEX13Q92968 403 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.71□□□□□ -1.98
CTR9-204ENST00000529355 DNAJC19Q96DA6 116 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 MS4A4EQ96PG1 132 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 SELENOSQ9BQE4 189 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 GON7Q9BXV9 100 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 VCX3AQ9NNX9 186 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 SDHAF3Q9NRP4 125 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 CYTL1Q9NRR1 136 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 GIN1Q9NXP7 522 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 CALYQ9NYX4 217 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 ZNF282Q9UDV7 671 aaPredicted RBP2.71□□□□□ -1.98
CTR9-204ENST00000529355 DDX19BQ9UMR2 479 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 C15orf41Q9Y2V0 281 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 TIMM22Q9Y584 194 aa2.71□□□□□ -1.98
CTR9-204ENST00000529355 EIF3AQ14152 1382 aaKnown RBP2.71□□□□□ -1.98
CTR9-204ENST00000529355 FHAD1B1AJZ9 1412 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 ARHGAP31Q2M1Z3 1444 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 TRAV6A0A075B6T7 132 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 TRAV26-1A0A087WT03 109 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 IGKV1D-13A0A0B4J2D9 117 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 C1orf232A0A0U1RR37 186 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 H0YCG3 227 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 H3BQV1 296 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 GOLGA8MH3BSY2 632 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 NDUFS8O00217 210 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 NBR2O15453 112 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 NIPSNAP2O75323 286 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 HLA-DRAP01903 254 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 APOEP02649 317 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 CLTAP09496 248 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 UBTFL6P0CB48 400 aaPredicted RBP2.7□□□□□ -1.98
CTR9-204ENST00000529355 IGKV1-13P0DP09 117 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms