RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 TRAPPC13A5PLN9 417 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 NME4O00746 187 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 HS3ST1O14792 307 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 TRAF3IP2O43734 574 aaPredicted RBP7.37□□□□□ -1.23
SSBP3-212ENST00000528930 CD3EP07766 207 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 DANCRP0C864 163 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 IGHV4-31P0DP07 118 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 HLA-DOBP13765 273 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 ZNF43P17038 809 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 TNFRSF1BP20333 461 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 HNF1AP20823 631 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 GTF2E2P29084 291 aaKnown RBP7.37□□□□□ -1.23
SSBP3-212ENST00000528930 KDELR2P33947 212 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 CLDN17P56750 224 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 SELENOWP63302 87 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 SLC25A3Q00325 362 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 MFSD13AQ14CX5 517 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 AWAT1Q58HT5 328 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 C9orf135Q5VTT2 229 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 CYB5R2Q6BCY4 276 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 OR7E24Q6IFN5 339 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 NIPAL3Q6P499 406 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 HACD2Q6Y1H2 254 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 CBLL1Q75N03 491 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 SSX8Q7RTT4 187 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 CARM1Q86X55 608 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 WDFY1Q8IWB7 410 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 MICU2Q8IYU8 434 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 ZNF611Q8N823 705 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 SCAIQ8N9R8 606 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 C1orf162Q8NEQ5 155 aaPredicted RBP7.37□□□□□ -1.23
SSBP3-212ENST00000528930 OR2T12Q8NG77 320 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 OR52N5Q8NH56 324 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 AKAP1Q92667 903 aaKnown RBP eCLIP7.37□□□□□ -1.23
SSBP3-212ENST00000528930 GCDHQ92947 438 aaPredicted RBP7.37□□□□□ -1.23
SSBP3-212ENST00000528930 MUCL1Q96DR8 90 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 EPYCQ99645 322 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 PKP2Q99959 881 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 HOPXQ9BPY8 73 aaPredicted RBP7.37□□□□□ -1.23
SSBP3-212ENST00000528930 BTBD10Q9BSF8 475 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 KRTAP4-2Q9BYR5 136 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 LINC00470Q9BZP3 86 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 DENND2DQ9H6A0 471 aaPredicted RBP7.37□□□□□ -1.23
SSBP3-212ENST00000528930 EFCAB1Q9HAE3 211 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 SLC17A5Q9NRA2 495 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 MRPL39Q9NYK5 338 aaKnown RBP7.37□□□□□ -1.23
SSBP3-212ENST00000528930 SELENONQ9NZV5 590 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 BAG5Q9UL15 447 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 SLC7A7Q9UM01 511 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 SH3GLB1Q9Y371 365 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 RNF115Q9Y4L5 304 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 CORINQ9Y5Q5 1042 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 ALPK2Q86TB3 2170 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 OR6C65A6NJZ3 312 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 SHISA9B4DS77 424 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 RPL36A-HNRNPH2H7BZ11 118 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 PLPP3O14495 311 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 CLOCKO15516 846 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 FKBP6O75344 327 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 IFNA14P01570 189 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 PRDX6P30041 224 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 GSTT1P30711 240 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 OR1E2P47887 323 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 SLC7A2P52569 658 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 LIPEQ05469 1076 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 PIN1Q13526 163 aaPredicted RBP7.36□□□□□ -1.23
SSBP3-212ENST00000528930 ZNF74Q16587 644 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 ZNF672Q499Z4 452 aaPredicted RBP7.36□□□□□ -1.23
SSBP3-212ENST00000528930 CYBRD1Q53TN4 286 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 PHYHD1Q5SRE7 291 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 TTC33Q6PID6 262 aaPredicted RBP7.36□□□□□ -1.23
SSBP3-212ENST00000528930 ARPINQ7Z6K5 226 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 NKAIN4Q8IVV8 208 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 TMEM123Q8N131 208 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 C17orf78Q8N4C9 275 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 KBTBD8Q8NFY9 601 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 OR5J2Q8NH18 312 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 PROX1Q92786 737 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 BCL2L2Q92843 193 aaPredicted RBP7.36□□□□□ -1.23
SSBP3-212ENST00000528930 NSL1Q96IY1 281 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 TXNDC15Q96J42 360 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 MPP4Q96JB8 637 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 ALKBH3Q96Q83 286 aaPredicted RBP7.36□□□□□ -1.23
SSBP3-212ENST00000528930 ZNF184Q99676 751 aaPredicted RBP7.36□□□□□ -1.23
SSBP3-212ENST00000528930 NELFAQ9H3P2 528 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 MEPEQ9NQ76 525 aaPredicted RBP7.36□□□□□ -1.23
SSBP3-212ENST00000528930 TBCCD1Q9NVR7 557 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 TAS2R5Q9NYW4 299 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 KCNS2Q9ULS6 477 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 RCE1Q9Y256 329 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 HIF3AQ9Y2N7 669 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 AP3M1Q9Y2T2 418 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 TENM3Q9P273 2699 aa7.36□□□□□ -1.23
SSBP3-212ENST00000528930 RYR2Q92736 4967 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 IGHV4-30-2A0A087WSY4 118 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 ZNF587BE7ETH6 402 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 ABCD4O14678 606 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 OR5F1O95221 314 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 CH25HO95992 272 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 MT-ATP6P00846 226 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms