RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 NTN4Q9HB63 628 aa2.35□□□□□ -2.03
BRCA2-203ENST00000528762 TNFRSF19Q9NS68 423 aa2.35□□□□□ -2.03
BRCA2-203ENST00000528762 MRPL22Q9NWU5 206 aaKnown RBP2.35□□□□□ -2.03
BRCA2-203ENST00000528762 QPCTLQ9NXS2 382 aa2.35□□□□□ -2.03
BRCA2-203ENST00000528762 MTCH1Q9NZJ7 389 aa2.35□□□□□ -2.03
BRCA2-203ENST00000528762 CLN8Q9UBY8 286 aa2.35□□□□□ -2.03
BRCA2-203ENST00000528762 NAP1L2Q9ULW6 460 aaPredicted RBP2.35□□□□□ -2.03
BRCA2-203ENST00000528762 SLC25A15Q9Y619 301 aa2.35□□□□□ -2.03
BRCA2-203ENST00000528762 SCN2AQ99250 2005 aa2.35□□□□□ -2.03
BRCA2-203ENST00000528762 TMEM94Q12767 1356 aa2.35□□□□□ -2.03
BRCA2-203ENST00000528762 TP53BP1Q12888 1972 aaPredicted RBP2.34□□□□□ -2.03
BRCA2-203ENST00000528762 A8MUA0 341 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 KRTAP4-16G5E9R7 235 aaPredicted RBP2.34□□□□□ -2.03
BRCA2-203ENST00000528762 ZBTB5O15062 677 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 SPOPO43791 374 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 EIF3GO75821 320 aaKnown RBP eCLIP2.34□□□□□ -2.03
BRCA2-203ENST00000528762 MMP23AO75900 390 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 SUPT7LO94864 414 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 OXTP01178 125 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 ALDOBP05062 364 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 ZNF250P15622 560 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 KLK2P20151 261 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 ZBTB25P24278 435 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 CD1BP29016 333 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 SLC1A1P43005 524 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 GPR6P46095 362 aaPredicted RBP2.34□□□□□ -2.03
BRCA2-203ENST00000528762 ETV1P50549 477 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 SSR4P51571 173 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 CRISP1P54107 249 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 CLDN18P56856 261 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 STX17P56962 302 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 ADARB1P78563 741 aaKnown RBP2.34□□□□□ -2.03
BRCA2-203ENST00000528762 WDR43Q15061 677 aaKnown RBP eCLIP2.34□□□□□ -2.03
BRCA2-203ENST00000528762 SOHLH1Q5JUK2 328 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 AADACL4Q5VUY2 407 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 RSBN1Q5VWQ0 802 aaPredicted RBP2.34□□□□□ -2.03
BRCA2-203ENST00000528762 TTC19Q6DKK2 380 aaPredicted RBP2.34□□□□□ -2.03
BRCA2-203ENST00000528762 OR52W1Q6IF63 320 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 TTC23LQ6PF05 361 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 RFLNAQ6ZTI6 216 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 PEX26Q7Z412 305 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 HSD17B11Q8NBQ5 300 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 VN1R2Q8NFZ6 395 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 OR1N2Q8NGR9 330 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 SLC7A13Q8TCU3 470 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 ARPC1AQ92747 370 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 FRAT1Q92837 279 aaPredicted RBP2.34□□□□□ -2.03
BRCA2-203ENST00000528762 NRIP2Q9BQI9 281 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 OR2AG1Q9H205 316 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 BLZF1Q9H2G9 400 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 NXF3Q9H4D5 531 aaKnown RBP2.34□□□□□ -2.03
BRCA2-203ENST00000528762 FBXO44Q9H4M3 255 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 RGCCQ9H4X1 137 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 SIAEQ9HAT2 523 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 CCNB1IP1Q9NPC3 277 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 STOX2Q9P2F5 926 aaPredicted RBP2.34□□□□□ -2.03
BRCA2-203ENST00000528762 CLCF1Q9UBD9 225 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 SLC17A4Q9Y2C5 497 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 GOLT1BQ9Y3E0 138 aa2.34□□□□□ -2.03
BRCA2-203ENST00000528762 MROH7-TTC4A0A0A0MT08 1334 aa2.34□□□□□ -2.04
BRCA2-203ENST00000528762 CNTNAP1P78357 1384 aa2.34□□□□□ -2.04
BRCA2-203ENST00000528762 TET2Q6N021 2002 aaPredicted RBP2.34□□□□□ -2.04
BRCA2-203ENST00000528762 AGRNO00468 2067 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 GTF3C1Q12789 2109 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 ZNF646O15015 1829 aaPredicted RBP2.33□□□□□ -2.04
BRCA2-203ENST00000528762 ZNFX1Q9P2E3 1918 aaKnown RBP2.33□□□□□ -2.04
BRCA2-203ENST00000528762 IGLV3-10A0A075B6K4 115 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 CDC7O00311 574 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 HAT1O14929 419 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 RNF113AO15541 343 aaKnown RBP2.33□□□□□ -2.04
BRCA2-203ENST00000528762 EIF4E2O60573 245 aaKnown RBP2.33□□□□□ -2.04
BRCA2-203ENST00000528762 CCNB2O95067 398 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 FGFR1OPO95684 399 aaKnown RBP2.33□□□□□ -2.04
BRCA2-203ENST00000528762 PLEKP08567 350 aaPredicted RBP2.33□□□□□ -2.04
BRCA2-203ENST00000528762 CHTF8P0CG12 524 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 ICAM2P13598 275 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 FOLR1P15328 257 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 CD1EP15812 388 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 PRKACAP17612 351 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 BCKDHBP21953 392 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 U2AF2P26368 475 aaKnown RBP eCLIP2.33□□□□□ -2.04
BRCA2-203ENST00000528762 RBMXP38159 391 aaKnown RBP2.33□□□□□ -2.04
BRCA2-203ENST00000528762 MRPL19P49406 292 aaKnown RBP2.33□□□□□ -2.04
BRCA2-203ENST00000528762 SUB1P53999 127 aaKnown RBP eCLIP2.33□□□□□ -2.04
BRCA2-203ENST00000528762 ZNF92Q03936 586 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 TWF1Q12792 350 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 AQP6Q13520 282 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 CYTH1Q15438 398 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 XKR4Q5GH76 650 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 PPM1LQ5SGD2 360 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 CASC10Q5T4H9 136 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 ANKRD26P1Q6NSI1 321 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 SCARA5Q6ZMJ2 495 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 FAM122BQ7Z309 247 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 HDDC2Q7Z4H3 204 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 LINC00523Q86TU6 105 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 APRG1Q8IVJ8 170 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 CMTM1Q8IZ96 169 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 PDIK1LQ8N165 341 aa2.33□□□□□ -2.04
BRCA2-203ENST00000528762 ZADH2Q8N4Q0 377 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms