RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 TRAF3IP2O43734 574 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-218ENST00000528232 B4GALT3O60512 393 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 GALR3O60755 368 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-218ENST00000528232 ZFAND5O76080 213 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 SERPINA7P05543 415 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 MGMTP16455 207 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 EN2P19622 333 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-218ENST00000528232 G0S2P27469 103 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 LAP3P28838 519 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 TAGLN2P37802 199 aaKnown RBP6.65□□□□□ -1.34
CTNND1-218ENST00000528232 SRP9P49458 86 aaKnown RBP6.65□□□□□ -1.34
CTNND1-218ENST00000528232 EPHA5P54756 1037 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 ISL1P61371 349 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 GPR50Q13585 617 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 ERV3-1Q14264 604 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 DPY19L2P2Q6ZN68 376 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 C17orf107Q6ZR85 190 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 PRICKLE2Q7Z3G6 844 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 ZNF695Q8IW36 515 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 ZNF683Q8IZ20 524 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 TMEM255BQ8WV15 326 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 APH1BQ8WW43 257 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 SLC35B4Q969S0 331 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 ZNF566Q969W8 418 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 SLC46A1Q96NT5 459 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 UBQLN3Q9H347 655 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 SYNPO2LQ9H987 977 aa6.65□□□□□ -1.34
CTNND1-218ENST00000528232 A0A0U1RQK1 487 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 LRP5LA4QPB2 252 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 ARRDC5A6NEK1 342 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 PRRT4C9JH25 899 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 HMGN4O00479 90 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 CTNSO60931 367 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 LGI1O95970 557 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 RPLP1P05386 114 aaKnown RBP6.65□□□□□ -1.35
CTNND1-218ENST00000528232 GAAP10253 952 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 ECI1P42126 302 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 FASLGP48023 281 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 ZP2Q05996 745 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 COL9A2Q14055 689 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-218ENST00000528232 MLF2Q15773 248 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-218ENST00000528232 TMEFF1Q8IYR6 380 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 IL22RA1Q8N6P7 574 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 DNAJC5GQ8N7S2 189 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 OR1J1Q8NGS3 322 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 OR52N1Q8NH53 320 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 C22orf15Q8WYQ4 148 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 OR1E3Q8WZA6 343 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 NUDT16L1Q9BRJ7 211 aaKnown RBP6.65□□□□□ -1.35
CTNND1-218ENST00000528232 NARFLQ9H6Q4 476 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 ZNF160Q9HCG1 818 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 SIDT1Q9NXL6 827 aaKnown RBP6.65□□□□□ -1.35
CTNND1-218ENST00000528232 NCDNQ9UBB6 729 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 CAMK2AQ9UQM7 478 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 B3GALT1Q9Y5Z6 326 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 LINC00862A6NCI5 91 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 MYOGP15173 224 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 SSTR4P31391 388 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 POU3F4P49335 361 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 CAV2P51636 162 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 CLDN20P56880 219 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 ARHGAP11BQ3KRB8 267 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 PARM1Q6UWI2 310 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 RNF165Q6ZSG1 346 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 ZNF679Q8IYX0 411 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 OR51T1Q8NGJ9 327 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 RLN3Q8WXF3 142 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 LCORQ96JN0 433 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-218ENST00000528232 CCDC74BQ96LY2 380 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 ZNF681Q96N22 645 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 USB1Q9BQ65 265 aaKnown RBP6.65□□□□□ -1.35
CTNND1-218ENST00000528232 SLC25A21Q9BQT8 299 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-218ENST00000528232 ACER3Q9NUN7 267 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 TAS2R16Q9NYV7 291 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 NDRG4Q9ULP0 352 aaKnown RBP6.65□□□□□ -1.35
CTNND1-218ENST00000528232 HHLA2Q9UM44 414 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 HEMK1Q9Y5R4 338 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-218ENST00000528232 SNX11Q9Y5W9 270 aa6.65□□□□□ -1.35
CTNND1-218ENST00000528232 SNRPGP15A8MWD9 76 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 ZNF736B4DX44 427 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-218ENST00000528232 SUSD5O60279 629 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 SLC16A7O60669 478 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 UTS2O95399 124 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 CTSLP07711 333 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 PRR35P0CG20 571 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 PCSK6P29122 969 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 SFTPDP35247 375 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 CSNK1A1P48729 337 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 PTTG1IPP53801 180 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 FOXK2Q01167 660 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 CAMK2BQ13554 666 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 ZNF266Q14584 549 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 ZNF385BQ569K4 471 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 SLC35D3Q5M8T2 416 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 FOXB2Q5VYV0 432 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 CSNK2A3Q8NEV1 391 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 OR5D14Q8NGL3 314 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 PATZ1Q9HBE1 687 aaKnown RBP6.64□□□□□ -1.35
CTNND1-218ENST00000528232 SLC6A20Q9NP91 592 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 PRDM9Q9NQV7 894 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms