RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 CXorf65A6NEN9 183 aa11.4□□□□□ -0.58
TSKU-203ENST00000527881 CDC40O60508 579 aaKnown RBP eCLIP11.4□□□□□ -0.58
TSKU-203ENST00000527881 CTAG2O75638 210 aa11.4□□□□□ -0.58
TSKU-203ENST00000527881 ADH1AP07327 375 aa11.4□□□□□ -0.58
TSKU-203ENST00000527881 CTSLP07711 333 aa11.4□□□□□ -0.58
TSKU-203ENST00000527881 PRKAR2AP13861 404 aaKnown RBP11.4□□□□□ -0.58
TSKU-203ENST00000527881 FOLR2P14207 255 aa11.4□□□□□ -0.58
TSKU-203ENST00000527881 NDUFB7P17568 137 aa11.4□□□□□ -0.58
TSKU-203ENST00000527881 MAOAP21397 527 aa11.4□□□□□ -0.58
TSKU-203ENST00000527881 NDUFS1P28331 727 aa11.4□□□□□ -0.58
TSKU-203ENST00000527881 FRKP42685 505 aaPredicted RBP11.4□□□□□ -0.58
TSKU-203ENST00000527881 RPS10P46783 165 aaKnown RBP11.4□□□□□ -0.58
TSKU-203ENST00000527881 RIDAP52758 137 aaKnown RBP11.4□□□□□ -0.58
TSKU-203ENST00000527881 EIPR1Q53HC9 387 aa11.4□□□□□ -0.58
TSKU-203ENST00000527881 EXOSC6Q5RKV6 272 aaKnown RBP11.4□□□□□ -0.58
TSKU-203ENST00000527881 DMRTC2Q8IXT2 367 aaPredicted RBP11.4□□□□□ -0.58
TSKU-203ENST00000527881 KLHDC8AQ8IYD2 350 aa11.4□□□□□ -0.58
TSKU-203ENST00000527881 ST7LQ8TDW4 575 aa11.4□□□□□ -0.58
TSKU-203ENST00000527881 GTF3AQ92664 365 aaKnown RBP11.4□□□□□ -0.58
TSKU-203ENST00000527881 ADAD1Q96M93 576 aaKnown RBP11.4□□□□□ -0.58
TSKU-203ENST00000527881 ACTRT3Q9BYD9 372 aa11.4□□□□□ -0.58
TSKU-203ENST00000527881 TRAV8-7A0A075B6U6 113 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 FGF16O43320 207 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 ALOX12BO75342 701 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 LEFTY1O75610 366 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 RAB6AP20340 208 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 AWAT1Q58HT5 328 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 POMGNT2Q8NAT1 580 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 NLGN2Q8NFZ4 835 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 OR5K2Q8NHB8 316 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 PPP4R1LQ9P1A2 415 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 LPAR3Q9UBY5 353 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 PLXNA3P51805 1871 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 TBX19O60806 448 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 ZNF432O94892 652 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 IFNA2P01563 188 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 ITGB2P05107 769 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 PSMB6P28072 239 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 LSSP48449 732 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 CAV2P51636 162 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 NR0B2Q15466 257 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 C10orf91Q5T1B1 145 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 MRPL2Q5T653 305 aaKnown RBP11.39□□□□□ -0.59
TSKU-203ENST00000527881 FRMD1Q8N878 549 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 TFGQ92734 400 aaPredicted RBP11.39□□□□□ -0.59
TSKU-203ENST00000527881 RBM14Q96PK6 669 aaKnown RBP11.39□□□□□ -0.59
TSKU-203ENST00000527881 SLC6A7Q99884 636 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 PRSS27Q9BQR3 290 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 OPA3Q9H6K4 179 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 RNF122Q9H9V4 155 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 ADAP2Q9NPF8 381 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 ZNF106Q9H2Y7 1883 aaKnown RBP11.39□□□□□ -0.59
TSKU-203ENST00000527881 A0A1W2PR48 441 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 C7orf77A4D0Y5 90 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 ARGFXA6NJG6 315 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 DUXAA6NLW8 204 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 TMEM189-UBE2V1I3L0A0 370 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 LRP3O75074 770 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 IFNA17P01571 189 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 HMGA1P17096 107 aaKnown RBP11.39□□□□□ -0.59
TSKU-203ENST00000527881 SLC11A1P49279 550 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 CHAF1BQ13112 559 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 MAP2K5Q13163 448 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 PPP1R1AQ13522 171 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 ZNF511Q8NB15 262 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 NUDCD2Q8WVJ2 157 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 KIRREL1Q96J84 757 aa11.39□□□□□ -0.59
TSKU-203ENST00000527881 C6orf106Q9H6K1 298 aaPredicted RBP11.39□□□□□ -0.59
TSKU-203ENST00000527881 SRPX2O60687 465 aaPredicted RBP11.38□□□□□ -0.59
TSKU-203ENST00000527881 ZIC2O95409 532 aaPredicted RBP11.38□□□□□ -0.59
TSKU-203ENST00000527881 AIFM1O95831 613 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 CD74P04233 296 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 SLC2A5P22732 501 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 GPR1P46091 355 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 NKAIN2Q5VXU1 208 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 CST9Q5W186 159 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 DHRS11Q6UWP2 260 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 CLEC9AQ6UXN8 241 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 UNQ9370/PRO34162Q6UXP9 181 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 TMEM64Q6YI46 380 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 ZNF793Q6ZN11 406 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 RNF44Q7L0R7 432 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 CLEC1AQ8NC01 280 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 OR4S1Q8NGB4 309 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 SFXN5Q8TD22 340 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 IP6K3Q96PC2 410 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 MFRPQ9BY79 579 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 DCTN6O00399 190 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 WNT11O96014 354 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 TACSTD2P09758 323 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 CD79AP11912 226 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 RCC1P18754 421 aaPredicted RBP11.38□□□□□ -0.59
TSKU-203ENST00000527881 ID4P47928 161 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 CASP6P55212 293 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 ACTBL2Q562R1 376 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 ANKRD16Q6P6B7 361 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 OR5T3Q8NGG3 340 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 FGF13Q92913 245 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 OCSTAMPQ9BR26 566 aa11.38□□□□□ -0.59
TSKU-203ENST00000527881 SUCNR1Q9BXA5 334 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms