RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 ACSM5Q6NUN0 579 aa20.11■□□□□ 0.81
CPSF1-202ENST00000527827 RANBP3LQ86VV4 465 aaPredicted RBP20.11■□□□□ 0.81
CPSF1-202ENST00000527827 ARMC8Q8IUR7 673 aa20.11■□□□□ 0.81
CPSF1-202ENST00000527827 BHLHE22Q8NFJ8 381 aaPredicted RBP20.11■□□□□ 0.81
CPSF1-202ENST00000527827 ZMYND19Q96E35 227 aaPredicted RBP20.11■□□□□ 0.81
CPSF1-202ENST00000527827 TMPRSS13Q9BYE2 586 aa20.11■□□□□ 0.81
CPSF1-202ENST00000527827 TAS2R5Q9NYW4 299 aa20.11■□□□□ 0.81
CPSF1-202ENST00000527827 SLC13A4Q9UKG4 626 aa20.11■□□□□ 0.81
CPSF1-202ENST00000527827 SLC22A23A1A5C7 686 aa20.1■□□□□ 0.81
CPSF1-202ENST00000527827 TRIM77I1YAP6 450 aa20.1■□□□□ 0.81
CPSF1-202ENST00000527827 PLPP2O43688 288 aa20.1■□□□□ 0.81
CPSF1-202ENST00000527827 DEAF1O75398 565 aaPredicted RBP20.1■□□□□ 0.81
CPSF1-202ENST00000527827 MFN2O95140 757 aa20.1■□□□□ 0.81
CPSF1-202ENST00000527827 MPZL1O95297 269 aa20.1■□□□□ 0.81
CPSF1-202ENST00000527827 ANPEPP15144 967 aa20.1■□□□□ 0.81
CPSF1-202ENST00000527827 GPX2P18283 190 aa20.1■□□□□ 0.81
CPSF1-202ENST00000527827 KLF3P57682 345 aaPredicted RBP20.1■□□□□ 0.81
CPSF1-202ENST00000527827 ZP4Q12836 540 aa20.1■□□□□ 0.81
CPSF1-202ENST00000527827 TMEM154Q6P9G4 183 aa20.1■□□□□ 0.81
CPSF1-202ENST00000527827 SYNPRQ8TBG9 265 aa20.1■□□□□ 0.81
CPSF1-202ENST00000527827 SPDL1Q96EA4 605 aa20.1■□□□□ 0.81
CPSF1-202ENST00000527827 MCHR1Q99705 422 aa20.1■□□□□ 0.81
CPSF1-202ENST00000527827 OR51B6Q9H340 312 aa20.1■□□□□ 0.81
CPSF1-202ENST00000527827 EVA1AQ9H8M9 152 aa20.1■□□□□ 0.81
CPSF1-202ENST00000527827 TCF7L2Q9NQB0 619 aa20.1■□□□□ 0.81
CPSF1-202ENST00000527827 NKIRAS2Q9NYR9 191 aa20.1■□□□□ 0.81
CPSF1-202ENST00000527827 RAB21Q9UL25 225 aa20.1■□□□□ 0.81
CPSF1-202ENST00000527827 ARHGAP32A7KAX9 2087 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 M0R3H8 397 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 DHHO43323 396 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 SERPINB7O75635 380 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 OR6A2O95222 327 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 CRYBB2P43320 205 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 SELENOVP59797 346 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 STX1BP61266 288 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 RBBP4Q09028 425 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 MELKQ14680 651 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 NPTX1Q15818 432 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 ZNF74Q16587 644 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 PCGF3Q3KNV8 242 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 MMEL1Q495T6 779 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 ZNF613Q6PF04 617 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 C1QL2Q7Z5L3 287 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 TEX29Q8N6K0 151 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 SMYD1Q8NB12 490 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 HIPK4Q8NE63 616 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 SGMS2Q8NHU3 365 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 ZNF519Q8TB69 540 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 ZNF566Q969W8 418 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 SLC25A44Q96H78 314 aaPredicted RBP20.09■□□□□ 0.81
CPSF1-202ENST00000527827 ARHGDIGQ99819 225 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 RBM4Q9BWF3 364 aaKnown RBP20.09■□□□□ 0.81
CPSF1-202ENST00000527827 CDH20Q9HBT6 801 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 CCDC167Q9P0B6 97 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 GPR160Q9UJ42 338 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 MEGF8Q7Z7M0 2845 aa20.09■□□□□ 0.81
CPSF1-202ENST00000527827 CHP2O43745 196 aa20.08■□□□□ 0.81
CPSF1-202ENST00000527827 FMO6PO60774 539 aa20.08■□□□□ 0.81
CPSF1-202ENST00000527827 LYPD3O95274 346 aa20.08■□□□□ 0.81
CPSF1-202ENST00000527827 SNAP29O95721 258 aa20.08■□□□□ 0.81
CPSF1-202ENST00000527827 CH25HO95992 272 aa20.08■□□□□ 0.81
CPSF1-202ENST00000527827 THY1P04216 161 aa20.08■□□□□ 0.81
CPSF1-202ENST00000527827 PGA4P0DJD7 388 aa20.08■□□□□ 0.81
CPSF1-202ENST00000527827 PGA3P0DJD8 388 aa20.08■□□□□ 0.81
CPSF1-202ENST00000527827 TMEM53Q6P2H8 277 aa20.08■□□□□ 0.81
CPSF1-202ENST00000527827 OR4K5Q8NGD3 323 aa20.08■□□□□ 0.81
CPSF1-202ENST00000527827 SNX33Q8WV41 574 aa20.08■□□□□ 0.81
CPSF1-202ENST00000527827 GTF3AQ92664 365 aaKnown RBP20.08■□□□□ 0.81
CPSF1-202ENST00000527827 RNF121Q9H920 327 aa20.08■□□□□ 0.81
CPSF1-202ENST00000527827 SLCO1C1Q9NYB5 712 aa20.08■□□□□ 0.81
CPSF1-202ENST00000527827 NKIRAS1Q9NYS0 192 aa20.08■□□□□ 0.81
CPSF1-202ENST00000527827 IGHV1-69-2A0A0G2JMI3 117 aa20.07■□□□□ 0.8
CPSF1-202ENST00000527827 ENTPD5O75356 428 aa20.07■□□□□ 0.8
CPSF1-202ENST00000527827 FARS2O95363 451 aaKnown RBP20.07■□□□□ 0.8
CPSF1-202ENST00000527827 IGHV2-5P01817 119 aa20.07■□□□□ 0.8
CPSF1-202ENST00000527827 LCKP06239 509 aa20.07■□□□□ 0.8
CPSF1-202ENST00000527827 QDPRP09417 244 aa20.07■□□□□ 0.8
CPSF1-202ENST00000527827 PCBP3P57721 371 aaKnown RBP20.07■□□□□ 0.8
CPSF1-202ENST00000527827 DUSP7Q16829 419 aa20.07■□□□□ 0.8
CPSF1-202ENST00000527827 LRRC17Q8N6Y2 441 aa20.07■□□□□ 0.8
CPSF1-202ENST00000527827 GPR32P1Q8NGA4 272 aa20.07■□□□□ 0.8
CPSF1-202ENST00000527827 OR6T1Q8NGN1 323 aa20.07■□□□□ 0.8
CPSF1-202ENST00000527827 C11orf40Q8WZ69 217 aa20.07■□□□□ 0.8
CPSF1-202ENST00000527827 RAB39BQ96DA2 213 aa20.07■□□□□ 0.8
CPSF1-202ENST00000527827 JMJD8Q96S16 334 aa20.07■□□□□ 0.8
CPSF1-202ENST00000527827 C1orf198Q9H425 327 aa20.07■□□□□ 0.8
CPSF1-202ENST00000527827 CORO2BQ9UQ03 480 aa20.07■□□□□ 0.8
CPSF1-202ENST00000527827 WIPI2Q9Y4P8 454 aa20.07■□□□□ 0.8
CPSF1-202ENST00000527827 CACNG2Q9Y698 323 aa20.07■□□□□ 0.8
CPSF1-202ENST00000527827 CPSF4LA6NMK7 179 aaKnown RBP20.06■□□□□ 0.8
CPSF1-202ENST00000527827 RNF13O43567 381 aa20.06■□□□□ 0.8
CPSF1-202ENST00000527827 ADRA2CP18825 462 aa20.06■□□□□ 0.8
CPSF1-202ENST00000527827 UCP2P55851 309 aa20.06■□□□□ 0.8
CPSF1-202ENST00000527827 MAGOHP61326 146 aaKnown RBP20.06■□□□□ 0.8
CPSF1-202ENST00000527827 TBC1D28Q2M2D7 210 aa20.06■□□□□ 0.8
CPSF1-202ENST00000527827 ENTPD8Q5MY95 495 aa20.06■□□□□ 0.8
CPSF1-202ENST00000527827 USP51Q70EK9 711 aa20.06■□□□□ 0.8
CPSF1-202ENST00000527827 DPPA2Q7Z7J5 298 aa20.06■□□□□ 0.8
CPSF1-202ENST00000527827 TSPYL5Q86VY4 417 aaPredicted RBP20.06■□□□□ 0.8
CPSF1-202ENST00000527827 PTOV1Q86YD1 416 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms