RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 SLC17A5Q9NRA2 495 aa10.27□□□□□ -0.77
CAPN1-204ENST00000526468 POLE3Q9NRF9 147 aa10.27□□□□□ -0.77
CAPN1-204ENST00000526468 PCDHGB4Q9UN71 923 aa10.27□□□□□ -0.77
CAPN1-204ENST00000526468 PCDHGB5Q9Y5G0 923 aa10.27□□□□□ -0.77
CAPN1-204ENST00000526468 PMF1-BGLAPU3KQ54 211 aa10.27□□□□□ -0.77
CAPN1-204ENST00000526468 TMED7-TICAM2A0A0A6YYA0 188 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 TCRBV5S2A0A599 114 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 LOC110117498-PIK3R3F6TDL0 507 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 NR5A2O00482 541 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 NME4O00746 187 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 AP3D1O14617 1153 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 LMX1BO60663 402 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 CPSF4O95639 269 aaKnown RBP10.26□□□□□ -0.77
CAPN1-204ENST00000526468 HNF1AP20823 631 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 SLC6A2P23975 617 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 S100A5P33763 92 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 OPRL1P41146 370 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 PDLIM4P50479 330 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 POLR2HP52434 150 aaKnown RBP10.26□□□□□ -0.77
CAPN1-204ENST00000526468 SLC35A1P78382 337 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 LSM11P83369 360 aaKnown RBP eCLIP10.26□□□□□ -0.77
CAPN1-204ENST00000526468 TGFBR3Q03167 851 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 KCNJ8Q15842 424 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 ANKDD1AQ495B1 522 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 C6orf141Q5SZD1 244 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 XAF1Q6GPH4 301 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 FAM166AQ6J272 317 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 BLOC1S3Q6QNY0 202 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 CYP2R1Q6VVX0 501 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 SLC46A3Q7Z3Q1 461 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 MAGEE2Q8TD90 523 aaPredicted RBP10.26□□□□□ -0.77
CAPN1-204ENST00000526468 FBLIM1Q8WUP2 373 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 XAGE5Q8WWM1 108 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 OIT3Q8WWZ8 545 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 PROX1Q92786 737 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 HPS1Q92902 700 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 DDIT4LQ96D03 193 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 MED30Q96HR3 178 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 SORCS2Q96PQ0 1159 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 KCNS3Q9BQ31 491 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 FUNDC2Q9BWH2 189 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 NDEL1Q9GZM8 345 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 GABARAPL1Q9H0R8 117 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 KAT8Q9H7Z6 458 aaKnown RBP10.26□□□□□ -0.77
CAPN1-204ENST00000526468 GORASP2Q9H8Y8 452 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 EXOSC3Q9NQT5 275 aaKnown RBP10.26□□□□□ -0.77
CAPN1-204ENST00000526468 SLC7A10Q9NS82 523 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 ASIC5Q9NY37 505 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 CRNNQ9UBG3 495 aaPredicted RBP10.26□□□□□ -0.77
CAPN1-204ENST00000526468 ENOPH1Q9UHY7 261 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 TMED7Q9Y3B3 224 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 FLVCR1Q9Y5Y0 555 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 PEX16Q9Y5Y5 336 aa10.26□□□□□ -0.77
CAPN1-204ENST00000526468 LOC100289279A0A1B0GTE1 492 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 TMEM72A0PK05 275 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 FXYD1O00168 92 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 WNT11O96014 354 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 APEHP13798 732 aaKnown RBP10.25□□□□□ -0.77
CAPN1-204ENST00000526468 M6PRP20645 277 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 UQCRC2P22695 453 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 APOBEC3AP31941 199 aaPredicted RBP10.25□□□□□ -0.77
CAPN1-204ENST00000526468 NTF4P34130 210 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 ETV6P41212 452 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 HTR3AP46098 478 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 IDH2P48735 452 aaKnown RBP10.25□□□□□ -0.77
CAPN1-204ENST00000526468 GSK3BP49841 420 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 CLDN8P56748 225 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 PLAURQ03405 335 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 EMX2Q04743 252 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 HIKESHIQ53FT3 197 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 OTUD3Q5T2D3 398 aaPredicted RBP10.25□□□□□ -0.77
CAPN1-204ENST00000526468 SYT6Q5T7P8 510 aaPredicted RBP10.25□□□□□ -0.77
CAPN1-204ENST00000526468 TSPO2Q5TGU0 170 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 SAXO2Q658L1 398 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 HDDC2Q7Z4H3 204 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 CADM3Q8N126 398 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 WDR31Q8NA23 367 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 GLB1L3Q8NCI6 653 aaPredicted RBP10.25□□□□□ -0.77
CAPN1-204ENST00000526468 OR5K1Q8NHB7 308 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 RHOXF1Q8NHV9 184 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 MUS81Q96NY9 551 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 ALKBH3Q96Q83 286 aaPredicted RBP10.25□□□□□ -0.77
CAPN1-204ENST00000526468 SLC35A5Q9BS91 424 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 NAA11Q9BSU3 229 aaPredicted RBP10.25□□□□□ -0.77
CAPN1-204ENST00000526468 DPY30Q9C005 99 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 SLA2Q9H6Q3 261 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 PARPBPQ9NWS1 579 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 MOKQ9UQ07 419 aa10.25□□□□□ -0.77
CAPN1-204ENST00000526468 ZC3H12DA2A288 527 aaKnown RBP10.24□□□□□ -0.77
CAPN1-204ENST00000526468 G3V2T6 193 aa10.24□□□□□ -0.77
CAPN1-204ENST00000526468 EIF1BO60739 113 aaKnown RBP10.24□□□□□ -0.77
CAPN1-204ENST00000526468 KRT33AO76009 404 aa10.24□□□□□ -0.77
CAPN1-204ENST00000526468 FKBP2P26885 142 aaKnown RBP10.24□□□□□ -0.77
CAPN1-204ENST00000526468 TACR3P29371 465 aa10.24□□□□□ -0.77
CAPN1-204ENST00000526468 MPGP29372 298 aa10.24□□□□□ -0.77
CAPN1-204ENST00000526468 CLK1P49759 484 aaKnown RBP10.24□□□□□ -0.77
CAPN1-204ENST00000526468 PRPS1P60891 318 aa10.24□□□□□ -0.77
CAPN1-204ENST00000526468 KCNJ10P78508 379 aa10.24□□□□□ -0.77
CAPN1-204ENST00000526468 LIPEQ05469 1076 aa10.24□□□□□ -0.77
CAPN1-204ENST00000526468 FAM120AOSQ5T036 256 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms