RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 TRAP1Q12931 704 aaKnown RBP4□□□□□ -1.77
USP48-211ENST00000526044 BNIP2Q12982 314 aa4□□□□□ -1.77
USP48-211ENST00000526044 GAGE1Q13065 139 aa4□□□□□ -1.77
USP48-211ENST00000526044 GAGE4Q13068 117 aa4□□□□□ -1.77
USP48-211ENST00000526044 MYBPHQ13203 477 aa4□□□□□ -1.77
USP48-211ENST00000526044 RAPSNQ13702 412 aa4□□□□□ -1.77
USP48-211ENST00000526044 CEACAM7Q14002 265 aa4□□□□□ -1.77
USP48-211ENST00000526044 MAPK11Q15759 364 aa4□□□□□ -1.77
USP48-211ENST00000526044 NNATQ16517 81 aa4□□□□□ -1.77
USP48-211ENST00000526044 HFEQ30201 348 aa4□□□□□ -1.77
USP48-211ENST00000526044 ZNF791Q3KP31 576 aaPredicted RBP4□□□□□ -1.77
USP48-211ENST00000526044 ZNF311Q5JNZ3 666 aa4□□□□□ -1.77
USP48-211ENST00000526044 DCST2Q5T1A1 773 aa4□□□□□ -1.77
USP48-211ENST00000526044 CCNJQ5T5M9 372 aa4□□□□□ -1.77
USP48-211ENST00000526044 PRAMEF8Q5VWM4 474 aa4□□□□□ -1.77
USP48-211ENST00000526044 PRAMEF7Q5VXH5 474 aa4□□□□□ -1.77
USP48-211ENST00000526044 AP1ARQ63HQ0 302 aa4□□□□□ -1.77
USP48-211ENST00000526044 SLC22A10Q63ZE4 541 aa4□□□□□ -1.77
USP48-211ENST00000526044 PET117Q6UWS5 81 aa4□□□□□ -1.77
USP48-211ENST00000526044 NPSR1Q6W5P4 371 aa4□□□□□ -1.77
USP48-211ENST00000526044 C18orf65Q6ZTR6 163 aa4□□□□□ -1.77
USP48-211ENST00000526044 CCDC80Q76M96 950 aa4□□□□□ -1.77
USP48-211ENST00000526044 GALNT10Q86SR1 603 aa4□□□□□ -1.77
USP48-211ENST00000526044 DHFR2Q86XF0 187 aa4□□□□□ -1.77
USP48-211ENST00000526044 PTOV1Q86YD1 416 aa4□□□□□ -1.77
USP48-211ENST00000526044 HPS6Q86YV9 775 aa4□□□□□ -1.77
USP48-211ENST00000526044 GPALPP1Q8IXQ4 340 aa4□□□□□ -1.77
USP48-211ENST00000526044 SLC34A3Q8N130 599 aa4□□□□□ -1.77
USP48-211ENST00000526044 SCCPDHQ8NBX0 429 aa4□□□□□ -1.77
USP48-211ENST00000526044 FDCSPQ8NFU4 85 aa4□□□□□ -1.77
USP48-211ENST00000526044 OR4C3Q8NH37 302 aa4□□□□□ -1.77
USP48-211ENST00000526044 OR52P1PQ8NH57 321 aa4□□□□□ -1.77
USP48-211ENST00000526044 BBS10Q8TAM1 723 aa4□□□□□ -1.77
USP48-211ENST00000526044 SLC26A7Q8TE54 656 aa4□□□□□ -1.77
USP48-211ENST00000526044 FIG4Q92562 907 aa4□□□□□ -1.77
USP48-211ENST00000526044 HAS2Q92819 552 aa4□□□□□ -1.77
USP48-211ENST00000526044 ERGIC1Q969X5 290 aa4□□□□□ -1.77
USP48-211ENST00000526044 FAM162AQ96A26 154 aa4□□□□□ -1.77
USP48-211ENST00000526044 EFHD2Q96C19 240 aaPredicted RBP4□□□□□ -1.77
USP48-211ENST00000526044 OMA1Q96E52 524 aa4□□□□□ -1.77
USP48-211ENST00000526044 TMEM19Q96HH6 336 aa4□□□□□ -1.77
USP48-211ENST00000526044 KLHL15Q96M94 604 aa4□□□□□ -1.77
USP48-211ENST00000526044 ZNF570Q96NI8 536 aa4□□□□□ -1.77
USP48-211ENST00000526044 DUX5Q96PT3 197 aa4□□□□□ -1.77
USP48-211ENST00000526044 ZNF607Q96SK3 696 aa4□□□□□ -1.77
USP48-211ENST00000526044 PIP5K1AQ99755 562 aa4□□□□□ -1.77
USP48-211ENST00000526044 UTP23Q9BRU9 249 aaKnown RBP4□□□□□ -1.77
USP48-211ENST00000526044 SPXQ9BT56 116 aa4□□□□□ -1.77
USP48-211ENST00000526044 TEX12Q9BXU0 123 aa4□□□□□ -1.77
USP48-211ENST00000526044 TRIM45Q9H8W5 580 aaPredicted RBP4□□□□□ -1.77
USP48-211ENST00000526044 GORASP2Q9H8Y8 452 aa4□□□□□ -1.77
USP48-211ENST00000526044 CACYBPQ9HB71 228 aaKnown RBP4□□□□□ -1.77
USP48-211ENST00000526044 SDHAF3Q9NRP4 125 aa4□□□□□ -1.77
USP48-211ENST00000526044 UBQLN4Q9NRR5 601 aa4□□□□□ -1.77
USP48-211ENST00000526044 CHCHD3Q9NX63 227 aaKnown RBP4□□□□□ -1.77
USP48-211ENST00000526044 CISD1Q9NZ45 108 aaKnown RBP4□□□□□ -1.77
USP48-211ENST00000526044 PROCRQ9UNN8 238 aa4□□□□□ -1.77
USP48-211ENST00000526044 ANGPT4Q9Y264 503 aa4□□□□□ -1.77
USP48-211ENST00000526044 IFT52Q9Y366 437 aa4□□□□□ -1.77
USP48-211ENST00000526044 WDFY3Q8IZQ1 3526 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 MED13Q9UHV7 2174 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 CPAMD8Q8IZJ3 1885 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 CEP250Q9BV73 2442 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 NPIPA5A0A0B4J1W7 369 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 CFAP73A6NFT4 308 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 LIPT2A6NK58 231 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 NPIPA7E9PJI5 369 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 H0YC42 278 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 H3BNH8 94 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 MKRN2OSH3BPM6 223 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 ZIC3O60481 467 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 ICOSLGO75144 302 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 GCM2O75603 506 aaPredicted RBP3.99□□□□□ -1.77
USP48-211ENST00000526044 UGT2B17O75795 530 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 CIB2O75838 187 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 CEACAM4O75871 244 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 SORBS2O94875 1100 aaKnown RBP3.99□□□□□ -1.77
USP48-211ENST00000526044 OR6B1O95007 311 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 MFN2O95140 757 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 UTS2O95399 124 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 WDPCPO95876 746 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 F10P00742 488 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 TFP02787 698 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 P04436 131 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 DBIP07108 87 aaKnown RBP3.99□□□□□ -1.77
USP48-211ENST00000526044 PABPC4LP0CB38 370 aaKnown RBP3.99□□□□□ -1.77
USP48-211ENST00000526044 NPIPA8P0DM63 369 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 IGHV4-30-4P0DP06 118 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 NCK1P16333 377 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 CCNA2P20248 432 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 CNR1P21554 472 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 PTAFRP25105 342 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 AQP1P29972 269 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 PCGF2P35227 344 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 DCTP40126 519 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 FBXW4P57775 412 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 KCNJ2P63252 427 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 SELENOWP63302 87 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 KCNJ10P78508 379 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 ARG2P78540 354 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms