RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 HBMQ6B0K9 141 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 RNASEKQ6P5S7 137 aaKnown RBP12.67□□□□□ -0.38
LRRK1-202ENST00000525284 OR13C8Q8NGS7 320 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 OR2A1Q8NGT9 310 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 FBXO27Q8NI29 283 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 NRG4Q8WWG1 115 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 SLC7A6Q92536 515 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 FUBP1Q96AE4 644 aaKnown RBP12.67□□□□□ -0.38
LRRK1-202ENST00000525284 TCTN2Q96GX1 697 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 QDPRP09417 244 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 WNT7BP56706 349 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 TAS2R45P59539 299 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 GHSRQ92847 366 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 SMIM7Q9BQ49 75 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 MST1RQ04912 1400 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 MN1Q10571 1320 aaPredicted RBP12.67□□□□□ -0.38
LRRK1-202ENST00000525284 A0A1W2PNV4 684 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 FGF18O76093 207 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 LEXMQ3ZCV2 418 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 OR2B11Q5JQS5 317 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 TBPL2Q6SJ96 375 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 Q6ZPB1 254 aaPredicted RBP12.67□□□□□ -0.38
LRRK1-202ENST00000525284 PGBD5Q8N414 524 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 UTP4Q969X6 686 aaKnown RBP12.67□□□□□ -0.38
LRRK1-202ENST00000525284 TMEM43Q9BTV4 400 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 TPSD1Q9BZJ3 242 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 GPR62Q9BZJ7 368 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 OR5V1Q9UGF6 321 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 TMEM59LQ9UK28 342 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 EMC9Q9Y3B6 208 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 TMEM184BQ9Y519 407 aaPredicted RBP12.67□□□□□ -0.38
LRRK1-202ENST00000525284 KDM4DQ6B0I6 523 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 LIPIQ6XZB0 460 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 TMEM106AQ96A25 262 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 TECTBQ96PL2 329 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 TOLLIPQ9H0E2 274 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 RICTORQ6R327 1708 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 LAMTOR5O43504 91 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 SLC25A6P12236 298 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 OR1D4P47884 311 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 PRSS45Q7RTY3 260 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 TCEAL8Q8IYN2 117 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 KHSRPQ92945 711 aaKnown RBP eCLIP12.67□□□□□ -0.38
LRRK1-202ENST00000525284 L3HYPDHQ96EM0 354 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 CBLCQ9ULV8 474 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 PPP1R3CQ9UQK1 317 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 FMN2Q9NZ56 1722 aa12.67□□□□□ -0.38
LRRK1-202ENST00000525284 CLDN24A6NM45 220 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 NAGAP17050 411 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 TMPRSS11FQ6ZWK6 438 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 GDPD3Q7L5L3 318 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 TMED6Q8WW62 240 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 IGSF8Q969P0 613 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 LHX6Q9UPM6 363 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 CACNA1FO60840 1977 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 ABCD4O14678 606 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 SSSCA1O60232 199 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 OR5AL1P0C617 328 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 GLI4P10075 376 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 DUSP1P28562 367 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 SLC6A12P48065 614 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 RPUSD3Q6P087 351 aaKnown RBP12.66□□□□□ -0.38
LRRK1-202ENST00000525284 OR10J5Q8NHC4 309 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 C7orf43Q8WVR3 580 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 TANKQ92844 425 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 ACTR3CQ9C0K3 210 aaPredicted RBP12.66□□□□□ -0.38
LRRK1-202ENST00000525284 NGBQ9NPG2 151 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 AP5S1Q9NUS5 200 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 LTN1O94822 1766 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 AKR1C3P42330 323 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 ZNF91Q05481 1191 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 MFAP5Q13361 173 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 NCR3LG1Q68D85 454 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 SLC38A6Q8IZM9 456 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 NECTIN4Q96NY8 510 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 PIGQQ9BRB3 760 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 ZNF541Q9H0D2 1346 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 A0A0B4J203 849 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 CSF3P09919 207 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 CEBPDP49716 269 aaPredicted RBP12.66□□□□□ -0.38
LRRK1-202ENST00000525284 CMPK2Q5EBM0 449 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 ZNF787Q6DD87 383 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 LINC00346Q8IVM7 164 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 FAM3CQ92520 227 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 EMG1Q92979 244 aaKnown RBP12.66□□□□□ -0.38
LRRK1-202ENST00000525284 DDOQ99489 341 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 TIMM9Q9Y5J7 89 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 S100A4P26447 101 aaKnown RBP12.66□□□□□ -0.38
LRRK1-202ENST00000525284 TMEM176BQ3YBM2 270 aaPredicted RBP12.66□□□□□ -0.38
LRRK1-202ENST00000525284 LYRM7Q5U5X0 104 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 OR51S1Q8NGJ8 323 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 ABHD4Q8TB40 342 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 SLC6A18Q96N87 628 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 ULBP3Q9BZM4 244 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 AGPAT4Q9NRZ5 378 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 BCL9O00512 1426 aa12.66□□□□□ -0.38
LRRK1-202ENST00000525284 KAT6AQ92794 2004 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 A0A1W2PPH5 198 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 UBL3O95164 117 aa12.65□□□□□ -0.38
LRRK1-202ENST00000525284 POU2F2P09086 479 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms