RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 UGT2B15P54855 530 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 FBXW4P57775 412 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 KRTAP10-1P60331 282 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 GK3PQ14409 553 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 PON3Q15166 354 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 SHHQ15465 462 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 KDM7AQ6ZMT4 941 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 PSTKQ8IV42 348 aaKnown RBP2.42□□□□□ -2.02
CD44-215ENST00000525241 ZCCHC7Q8N3Z6 543 aaKnown RBP2.42□□□□□ -2.02
CD44-215ENST00000525241 MREGQ8N565 214 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 BHLHE23Q8NDY6 225 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 OR10G4Q8NGN3 311 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 OR1L6Q8NGR2 347 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 FRZBQ92765 325 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 TMEM54Q969K7 222 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 TCEANC2Q96MN5 208 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 OR2A5Q96R48 311 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 SH3GL3Q99963 347 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 KCTD14Q9BQ13 255 aaPredicted RBP2.42□□□□□ -2.02
CD44-215ENST00000525241 RPP21Q9H633 154 aaKnown RBP2.42□□□□□ -2.02
CD44-215ENST00000525241 SGK2Q9HBY8 427 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 ZNF629Q9UEG4 869 aaPredicted RBP2.42□□□□□ -2.02
CD44-215ENST00000525241 NPTNQ9Y639 398 aa2.42□□□□□ -2.02
CD44-215ENST00000525241 CENPJQ9HC77 1338 aaPredicted RBP2.42□□□□□ -2.02
CD44-215ENST00000525241 CIB4A0PJX0 185 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 INS-IGF2F8WCM5 200 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 KMOO15229 486 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 RHOXF2BP0C7M4 288 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 PRPS2P11908 318 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 PGAM1P18669 254 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 PRPHP41219 470 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 EPS15P42566 896 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 RORCP51449 518 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 ACTR1AP61163 376 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 ZNF92Q03936 586 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 C6orf226Q5I0X4 101 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 ZNF493Q6ZR52 646 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 PEX26Q7Z412 305 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 TMEM135Q86UB9 458 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 PGAM4Q8N0Y7 254 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 TTC5Q8N0Z6 440 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 CEP112Q8N8E3 955 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 EIF1ADQ8N9N8 165 aaKnown RBP2.41□□□□□ -2.02
CD44-215ENST00000525241 OR4F6Q8NGB9 312 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 OR8J1Q8NGP2 316 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 OR5W2Q8NH69 310 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 SPIN2AQ99865 258 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 SPIN2BQ9BPZ2 258 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 SLC39A3Q9BRY0 314 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 NDFIP1Q9BT67 221 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 FN3KRPQ9HA64 309 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 ZNF222Q9UK12 451 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 KIAA1257Q9ULG3 409 aa2.41□□□□□ -2.02
CD44-215ENST00000525241 TRAV39A0A0B4J263 110 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 BTBD17A6NE02 478 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 OR52A4PA6NMU1 304 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 EIF3GO75821 320 aaKnown RBP eCLIP2.4□□□□□ -2.03
CD44-215ENST00000525241 ERLIN2O94905 339 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 CISD3P0C7P0 127 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 FOLR1P15328 257 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 STK11Q15831 433 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 LY6EQ16553 131 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 POU2AF1Q16633 256 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 IMMTQ16891 758 aaKnown RBP2.4□□□□□ -2.03
CD44-215ENST00000525241 ABCA11PQ4W5N1 156 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 HES5Q5TA89 166 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 DUX4L9Q6RFH8 374 aaPredicted RBP2.4□□□□□ -2.03
CD44-215ENST00000525241 LRRC74BQ6ZQY2 392 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 SDR9C7Q8NEX9 313 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 DEDD2Q8WXF8 326 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 IFT74Q96LB3 600 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 MRPL37Q9BZE1 423 aaKnown RBP2.4□□□□□ -2.03
CD44-215ENST00000525241 ROPN1BQ9BZX4 212 aaPredicted RBP2.4□□□□□ -2.03
CD44-215ENST00000525241 LRRC40Q9H9A6 602 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 NT5MQ9NPB1 228 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 ZNF835Q9Y2P0 537 aa2.4□□□□□ -2.03
CD44-215ENST00000525241 A0A0B4J2A0 478 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 HIDE1A8MVS5 230 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 BET1O15155 118 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 B4GALT5O43286 388 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 UTS2O95399 124 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 TMEM50AO95807 157 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 ZNF286BP0CG31 522 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 KITLGP21583 273 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 AK4P27144 223 aaPredicted RBP2.39□□□□□ -2.03
CD44-215ENST00000525241 SERPINB5P36952 375 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 CDKN1BP46527 198 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 CYB561P49447 251 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 CDH4P55283 916 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 Q5W150 140 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 CENPPQ6IPU0 288 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 NANOGP8Q6NSW7 305 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 TMEM179Q6ZVK1 233 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 NCCRP1Q6ZVX7 275 aaPredicted RBP2.39□□□□□ -2.03
CD44-215ENST00000525241 TGIF2LXQ8IUE1 241 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 ZNF709Q8N972 641 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 HSD17B11Q8NBQ5 300 aa2.39□□□□□ -2.03
CD44-215ENST00000525241 RTBDNQ9BSG5 229 aaPredicted RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms