RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 USH1GQ495M9 461 aa2.11□□□□□ -2.07
COPB1-203ENST00000525214 DMRTC1Q5HYR2 192 aa2.11□□□□□ -2.07
COPB1-203ENST00000525214 RIPPLY2Q5TAB7 128 aa2.11□□□□□ -2.07
COPB1-203ENST00000525214 CASC1Q6TDU7 716 aa2.11□□□□□ -2.07
COPB1-203ENST00000525214 ZNF493Q6ZR52 646 aa2.11□□□□□ -2.07
COPB1-203ENST00000525214 UTS2BQ765I0 119 aa2.11□□□□□ -2.07
COPB1-203ENST00000525214 THRSPQ92748 146 aa2.11□□□□□ -2.07
COPB1-203ENST00000525214 THUMPD2Q9BTF0 503 aaKnown RBP2.11□□□□□ -2.07
COPB1-203ENST00000525214 EXD2Q9NVH0 621 aa2.11□□□□□ -2.07
COPB1-203ENST00000525214 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.11□□□□□ -2.07
COPB1-203ENST00000525214 CGNQ9P2M7 1197 aaKnown RBP2.11□□□□□ -2.07
COPB1-203ENST00000525214 LAMP5Q9UJQ1 280 aa2.11□□□□□ -2.07
COPB1-203ENST00000525214 RABL2BQ9UNT1 228 aa2.11□□□□□ -2.07
COPB1-203ENST00000525214 RRP15Q9Y3B9 282 aaKnown RBP2.11□□□□□ -2.07
COPB1-203ENST00000525214 NLRC5Q86WI3 1866 aa2.11□□□□□ -2.07
COPB1-203ENST00000525214 A0A1B0GWJ7 208 aa2.1□□□□□ -2.07
COPB1-203ENST00000525214 CLRN2A0PK11 232 aa2.1□□□□□ -2.07
COPB1-203ENST00000525214 OR5B21A6NL26 309 aa2.1□□□□□ -2.07
COPB1-203ENST00000525214 A8MUI8 341 aa2.1□□□□□ -2.07
COPB1-203ENST00000525214 KRT8P05787 483 aa2.1□□□□□ -2.07
COPB1-203ENST00000525214 HSPA5P11021 654 aaKnown RBP2.1□□□□□ -2.07
COPB1-203ENST00000525214 GNA11P29992 359 aa2.1□□□□□ -2.07
COPB1-203ENST00000525214 IFNAR2P48551 515 aa2.1□□□□□ -2.07
COPB1-203ENST00000525214 SUB1P53999 127 aaKnown RBP eCLIP2.1□□□□□ -2.076e-12■■■■■ 37.5
COPB1-203ENST00000525214 PITPNAQ00169 270 aa2.1□□□□□ -2.07
COPB1-203ENST00000525214 LRRC23Q53EV4 343 aaPredicted RBP2.1□□□□□ -2.07
COPB1-203ENST00000525214 KDM7AQ6ZMT4 941 aa2.1□□□□□ -2.07
COPB1-203ENST00000525214 TMEM123Q8N131 208 aa2.1□□□□□ -2.07
COPB1-203ENST00000525214 SDR42E1Q8WUS8 393 aa2.1□□□□□ -2.07
COPB1-203ENST00000525214 RNF157Q96PX1 679 aa2.1□□□□□ -2.07
COPB1-203ENST00000525214 DOK1Q99704 481 aa2.1□□□□□ -2.07
COPB1-203ENST00000525214 TPPP3Q9BW30 176 aa2.1□□□□□ -2.07
COPB1-203ENST00000525214 COX16Q9P0S2 106 aa2.1□□□□□ -2.07
COPB1-203ENST00000525214 KCNIP3Q9Y2W7 256 aa2.1□□□□□ -2.07
COPB1-203ENST00000525214 C17orf51A8MQB3 221 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 VGLL3A8MV65 326 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 GPR89AB7ZAQ6 455 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 PRRG1O14668 218 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 GMFGO60234 142 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 RAMP3O60896 148 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 RP2O75695 350 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 BCHEP06276 602 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 GPR89BP0CG08 455 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 KRT13P13646 458 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 DRD5P21918 477 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 RGS4P49798 205 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 HNMTP50135 292 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 GANABQ14697 944 aaKnown RBP2.09□□□□□ -2.07
COPB1-203ENST00000525214 SPIN3Q5JUX0 258 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 SLC25A24Q6NUK1 477 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 RGS9BPQ6ZS82 235 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 MAIP1Q8WWC4 291 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 NARS2Q96I59 477 aaKnown RBP2.09□□□□□ -2.07
COPB1-203ENST00000525214 CLCC1Q96S66 551 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 CCT7Q99832 543 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 OSBPL10Q9BXB5 764 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 COQ10BQ9H8M1 238 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 MRPL47Q9HD33 250 aaKnown RBP2.09□□□□□ -2.07
COPB1-203ENST00000525214 FARSBQ9NSD9 589 aaKnown RBP2.09□□□□□ -2.07
COPB1-203ENST00000525214 GPATCH2LQ9NWQ4 482 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 DCAF16Q9NXF7 216 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 TMOD2Q9NZR1 351 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 PIPOXQ9P0Z9 390 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 MRPS7Q9Y2R9 242 aaKnown RBP2.09□□□□□ -2.07
COPB1-203ENST00000525214 SIGLEC9Q9Y336 463 aa2.09□□□□□ -2.07
COPB1-203ENST00000525214 CENPJQ9HC77 1338 aaPredicted RBP2.09□□□□□ -2.08
COPB1-203ENST00000525214 MSH6P52701 1360 aa2.09□□□□□ -2.08
COPB1-203ENST00000525214 H0YCG3 227 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 RHOBTB1O94844 696 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 GABARAPO95166 117 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 SLC25A14O95258 325 aaPredicted RBP2.08□□□□□ -2.08
COPB1-203ENST00000525214 CCDC130P13994 396 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 NCF1P14598 390 aaPredicted RBP2.08□□□□□ -2.08
COPB1-203ENST00000525214 TCN1P20061 433 aaPredicted RBP2.08□□□□□ -2.08
COPB1-203ENST00000525214 RPL13AP40429 203 aaKnown RBP2.08□□□□□ -2.08
COPB1-203ENST00000525214 OPRD1P41143 372 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 CX3CR1P49238 355 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 PPT1P50897 306 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 ARFIP1P53367 373 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 IRX3P78415 501 aaPredicted RBP2.08□□□□□ -2.08
COPB1-203ENST00000525214 ELP6Q0PNE2 266 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 SCRN3Q0VDG4 424 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 DPYSL2Q16555 572 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 TAF9Q16594 264 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 TPD52L1Q16890 204 aaPredicted RBP2.08□□□□□ -2.08
COPB1-203ENST00000525214 CEP55Q53EZ4 464 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 ATAD3BQ5T9A4 648 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 CEMP1Q6PRD7 247 aaPredicted RBP2.08□□□□□ -2.08
COPB1-203ENST00000525214 MIR7-3HGQ8N6C7 128 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 SHC3Q92529 594 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 TIMM29Q9BSF4 260 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 ANP32EQ9BTT0 268 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 FAIM2Q9BWQ8 316 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 ADAP2Q9NPF8 381 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 ISYNA1Q9NPH2 558 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 SNX6Q9UNH7 406 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 UBIAD1Q9Y5Z9 338 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 SEC16AO15027 2179 aa2.08□□□□□ -2.08
COPB1-203ENST00000525214 ZNF726A6NNF4 738 aa2.07□□□□□ -2.08
COPB1-203ENST00000525214 MAGEB3O15480 346 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms