RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 NUDT6P53370 316 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 CTXN1P60606 82 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 MXRA7P84157 204 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 RAB39AQ14964 217 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 ADIPOQQ15848 244 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 SWI5Q1ZZU3 235 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 ARMC4Q5T2S8 1044 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 KRT80Q6KB66 452 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 MBOAT2Q6ZWT7 520 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 PIWIL3Q7Z3Z3 882 aaKnown RBP11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 CYP4Z1Q86W10 505 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 PGAM4Q8N0Y7 254 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 SLC22A24Q8N4F4 322 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 NOXO1Q8NFA2 376 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 OR4F15Q8NGB8 312 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 OR13C2Q8NGS9 318 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 ACOT11Q8WXI4 607 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 NANOS1Q8WY41 292 aaKnown RBP11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 HDAC2Q92769 488 aaKnown RBP11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 ZNF75AQ96N20 296 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 CCT8L2Q96SF2 557 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 MRPL13Q9BYD1 178 aaKnown RBP11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 NMNAT1Q9HAN9 279 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 BARX1Q9HBU1 254 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 MOV10Q9HCE1 1003 aaKnown RBP11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 DCAF13Q9NV06 445 aaKnown RBP11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 TMEM38BQ9NVV0 291 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 ZNF346Q9UL40 294 aaKnown RBP11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 HIF3AQ9Y2N7 669 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 PMF1-BGLAPU3KQ54 211 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 UBL3O95164 117 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 SLC2A10O95528 541 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 RAB36O95755 333 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 HEXAP06865 529 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 H1F0P07305 194 aaKnown RBP11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 OR8G3PP0DMU2 310 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 ZNF14P17017 642 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 VLDLRP98155 873 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 FMODQ06828 376 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 FHL1Q13642 323 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 DAG1Q14118 895 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 ETFDHQ16134 617 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 HIST3H3Q16695 136 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 PODNL1Q6PEZ8 512 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 RRM2BQ7LG56 351 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 OAFQ86UD1 273 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 CDK20Q8IZL9 346 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 DEFB107AQ8IZN7 70 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 RNF113BQ8IZP6 322 aaKnown RBP11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 CLDN22Q8N7P3 220 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 LRRC75AQ8NAA5 344 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 OR4K5Q8NGD3 323 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 NSMAFQ92636 917 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 C7orf34Q96L11 122 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 VRK1Q99986 396 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 REG4Q9BYZ8 158 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 TXNIPQ9H3M7 391 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 RNF121Q9H920 327 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 NDUFAF4Q9P032 175 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 CD300AQ9UGN4 299 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 SAMD4AQ9UPU9 718 aaKnown RBP11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 FAM32AQ9Y421 112 aaKnown RBP11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 PLCE1Q9P212 2302 aa11.12□□□□□ -0.63
TRAPPC4-205ENST00000525079 SETD2Q9BYW2 2564 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 IGKV1D-43A0A0B4J1Z2 117 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 SH3PXD2BA1X283 911 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 HTR3EA5X5Y0 456 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 FAM171A2A8MVW0 826 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 H7C417 338 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 CDC42EP2O14613 210 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 BMP4P12644 408 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 HSD17B1P14061 328 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 HOXB4P17483 251 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 CDAP32320 146 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 ZNF84P51523 738 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 RPL27P61353 136 aaKnown RBP11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 SNRPD2P62316 118 aaKnown RBP11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 CD47Q08722 323 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 SNTB2Q13425 540 aaKnown RBP11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 FGD3Q5JSP0 725 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 SAMD4BQ5PRF9 694 aaKnown RBP11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 C16orf89Q6UX73 402 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 DNM1P46Q6ZS02 220 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 SVOPLQ8N434 492 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 LRRC18Q8N456 261 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 FITM2Q8N6M3 262 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 ZNF525Q8N782 197 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 ANKS4BQ8N8V4 417 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 NUP37Q8NFH4 326 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 IL17RDQ8NFM7 739 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 OR52J3Q8NH60 311 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 SLC7A13Q8TCU3 470 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 PYURFQ96I23 114 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 FAM46AQ96IP4 442 aaKnown RBP11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 SORCS2Q96PQ0 1159 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 TSPAN32Q96QS1 320 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 SEPHS2Q99611 448 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 RHNO1Q9BSD3 238 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 GORASP2Q9H8Y8 452 aa11.11□□□□□ -0.63
TRAPPC4-205ENST00000525079 MTORP42345 2549 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms