RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 STK11Q15831 433 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 AANATQ16613 207 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 CDO1Q16878 200 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 TYSND1Q2T9J0 566 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 TMEM44Q2T9K0 475 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 CASC10Q5T4H9 136 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 GPR157Q5UAW9 335 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 OLFML2AQ68BL7 652 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 ASPHD2Q6ICH7 369 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 CAPN13Q6MZZ7 669 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 LEG1Q6P5S2 330 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 C16orf87Q6PH81 154 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 FAM151BQ6UXP7 276 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 SHISA6Q6ZSJ9 500 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 CENPUQ71F23 418 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 NUP54Q7Z3B4 507 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 CEACAM19Q7Z692 300 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 ADAMTSL2Q86TH1 951 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 LINC00523Q86TU6 105 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 IFNEQ86WN2 208 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 GRAMD2AQ8IUY3 354 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 MISPQ8IVT2 679 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 CCDC36Q8IYA8 594 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 PYROXD2Q8N2H3 581 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 FGFRL1Q8N441 504 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 BPIFB2Q8N4F0 458 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 FADS6Q8N9I5 356 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 FAM83FQ8NEG4 500 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 OR4F15Q8NGB8 312 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 OR9A1PQ8NGU1 263 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 CFAP61Q8NHU2 1237 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 MAGEE2Q8TD90 523 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 ZNF721Q8TF20 911 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 PTPMT1Q8WUK0 201 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 TFB1MQ8WVM0 346 aaKnown RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 SLC13A3Q8WWT9 602 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 ATL1Q8WXF7 558 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 KRT35Q92764 455 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 TOMM40LQ969M1 308 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 NCLNQ969V3 563 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 CPNE4Q96A23 557 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 EFHD2Q96C19 240 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 HAUS1Q96CS2 278 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 RAB39BQ96DA2 213 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 MUCL1Q96DR8 90 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 TRIM44Q96DX7 344 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 WDR34Q96EX3 536 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 DNAJA3Q96EY1 480 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 CNRIP1Q96F85 164 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 PGM2Q96G03 612 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 PGAM5Q96HS1 289 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 FAM71F1Q96KD3 344 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 CMTM3Q96MX0 182 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 C7orf26Q96N11 449 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 ANKRD27Q96NW4 1050 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 MCEEQ96PE7 176 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 PEBP4Q96S96 227 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 SLC30A2Q9BRI3 323 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 ANP32EQ9BTT0 268 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 LMF2Q9BU23 707 aaKnown RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 KATNB1Q9BVA0 655 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 CDCA4Q9BXL8 241 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 PINK1Q9BXM7 581 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 CACNG6Q9BXT2 260 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 CAPS2Q9BXY5 557 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 BPESC1Q9GZL8 116 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 RAB1BQ9H0U4 201 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 DEFB127Q9H1M4 99 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 GBA3Q9H227 469 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 DHX35Q9H5Z1 703 aaKnown RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 RANBP3Q9H6Z4 567 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 SUDS3Q9H7L9 328 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 MYNNQ9NPC7 610 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 PPANQ9NQ55 473 aaKnown RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 EIF2B3Q9NR50 452 aaKnown RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 SERINC1Q9NRX5 453 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 KLHL28Q9NXS3 571 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 UVRAGQ9P2Y5 699 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 CRNNQ9UBG3 495 aaPredicted RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 TBK1Q9UHD2 729 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 FBXL3Q9UKT7 428 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 MCTS1Q9ULC4 181 aaKnown RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 PSMD13Q9UNM6 376 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 WIPI2Q9Y4P8 454 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 BZW2Q9Y6E2 419 aaKnown RBP1.22□□□□□ -2.21
CD44-212ENST00000524922 CLCA3PQ9Y6N3 262 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 SESN1Q9Y6P5 492 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 SPACA6W5XKT8 324 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 DNAH5Q8TE73 4624 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 ALMS1Q8TCU4 4167 aa1.22□□□□□ -2.21
CD44-212ENST00000524922 DNAH10Q8IVF4 4471 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 ARPC4-TTLL3A0A0A6YYG9 625 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 A0A0G2JMM0 328 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 A0A1W2PPB8 328 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 A0A1W2PRS3 328 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 CCDC162PA2VCL2 907 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 DPRXA6NFQ7 191 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 ANKRD61A6NGH8 418 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 KIR3DP1A8MWS1 328 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms