RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 CADM3Q8N126 398 aa10.58□□□□□ -0.72
PTPRK-216ENST00000524481 ZNF485Q8NCK3 441 aa10.58□□□□□ -0.72
PTPRK-216ENST00000524481 OR5AK2Q8NH90 309 aa10.58□□□□□ -0.72
PTPRK-216ENST00000524481 OR14L1PQ8NHC6 308 aa10.58□□□□□ -0.72
PTPRK-216ENST00000524481 ZC3H10Q96K80 434 aaKnown RBP10.58□□□□□ -0.72
PTPRK-216ENST00000524481 EMC7Q9NPA0 242 aa10.58□□□□□ -0.72
PTPRK-216ENST00000524481 SEMA5BQ9P283 1151 aa10.58□□□□□ -0.72
PTPRK-216ENST00000524481 B9D1Q9UPM9 204 aa10.58□□□□□ -0.72
PTPRK-216ENST00000524481 PLPP3O14495 311 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 WDPCPO95876 746 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 TACSTD2P09758 323 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 ZNF43P17038 809 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 ACTA2P62736 377 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 ACTG2P63267 376 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 INSM1Q01101 510 aaPredicted RBP10.57□□□□□ -0.72
PTPRK-216ENST00000524481 TAF13Q15543 124 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 CEP78Q5JTW2 689 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 ATP1A1-AS1Q5TC04 95 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 SLC22A10Q63ZE4 541 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 MZT2AQ6P582 158 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 C6orf15Q6UXA7 325 aaPredicted RBP10.57□□□□□ -0.72
PTPRK-216ENST00000524481 H1FNTQ75WM6 255 aaPredicted RBP10.57□□□□□ -0.72
PTPRK-216ENST00000524481 FAM122BQ7Z309 247 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 OR2Y1Q8NGV0 311 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 ENKURQ8TC29 256 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 THOC3Q96J01 351 aaKnown RBP10.57□□□□□ -0.72
PTPRK-216ENST00000524481 DMRTB1Q96MA1 342 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 PTDSS2Q9BVG9 487 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 EXOSC3Q9NQT5 275 aaKnown RBP10.57□□□□□ -0.72
PTPRK-216ENST00000524481 DDX28Q9NUL7 540 aaKnown RBP10.57□□□□□ -0.72
PTPRK-216ENST00000524481 FOXJ2Q9P0K8 574 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 FBXL3Q9UKT7 428 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 TCFL5Q9UL49 500 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 FARSAQ9Y285 508 aaKnown RBP10.57□□□□□ -0.72
PTPRK-216ENST00000524481 CEP295Q9C0D2 2601 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 IGLV3-12A0A075B6K2 115 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 IGKV1D-43A0A0B4J1Z2 117 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 TRABD2BA6NFA1 517 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 ZNF726A6NNF4 738 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 TAF4O00268 1085 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 TO15178 435 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 EEF1E1O43324 174 aaKnown RBP10.57□□□□□ -0.72
PTPRK-216ENST00000524481 TNFSF15O95150 251 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 CD3GP09693 182 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 CAPZA2P47755 286 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 CLRN1P58418 232 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 HSF1Q00613 529 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 OXA1LQ15070 435 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 PCOLCEQ15113 449 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 ZNF79Q15937 498 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 LINC01590Q5TEZ4 76 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 ZNF385CQ66K41 422 aaPredicted RBP10.57□□□□□ -0.72
PTPRK-216ENST00000524481 SFXN4Q6P4A7 337 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 ZNF554Q86TJ5 538 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 CCDC190Q86UF4 302 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 LRRC18Q8N456 261 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 OR6N1Q8NGY5 312 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 CT55Q8WUE5 264 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 TMEM106AQ96A25 262 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 KLHL15Q96M94 604 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 SPAARA0A1B0GVQ0 90 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 DCDC2BA2VCK2 349 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 GNALP38405 381 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 SRP9P49458 86 aaKnown RBP10.57□□□□□ -0.72
PTPRK-216ENST00000524481 PRSS12P56730 875 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 SCN1BQ07699 218 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 CDK5R1Q15078 307 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 SGCBQ16585 318 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 FAM198BQ6UWH4 519 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 DCXRQ7Z4W1 244 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 TMPRSS12Q86WS5 348 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 BMPERQ8N8U9 685 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 ZNF441Q8N8Z8 693 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 OR1J4Q8NGS1 313 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 NUBPLQ8TB37 319 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 RBP7Q96R05 134 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 ATF6BQ99941 703 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 P4HTMQ9NXG6 502 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 NLKQ9UBE8 527 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 MRM2Q9UI43 246 aaKnown RBP10.57□□□□□ -0.72
PTPRK-216ENST00000524481 EMC9Q9Y3B6 208 aa10.57□□□□□ -0.72
PTPRK-216ENST00000524481 DSPP15924 2871 aaKnown RBP10.56□□□□□ -0.72
PTPRK-216ENST00000524481 RPS4XP62701 263 aaKnown RBP10.56□□□□□ -0.72
PTPRK-216ENST00000524481 MC2RQ01718 297 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 GLO1Q04760 184 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 ZFP36L1Q07352 338 aaKnown RBP10.56□□□□□ -0.72
PTPRK-216ENST00000524481 MFAP5Q13361 173 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 C9orf135Q5VTT2 229 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 WDFY1Q8IWB7 410 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 NAXEQ8NCW5 288 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 UCN2Q96RP3 112 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 RBM24Q9BX46 236 aaKnown RBP10.56□□□□□ -0.72
PTPRK-216ENST00000524481 IGHV1-45A0A0A0MS14 117 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 FAM240BA0A1B0GVZ2 78 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 ANKUB1A6NFN9 424 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 ZNF814B7Z6K7 855 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 PLPP2O43688 288 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 WNT11O96014 354 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 P04436 131 aa10.56□□□□□ -0.72
PTPRK-216ENST00000524481 EIF4EP06730 217 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms