RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 PLEKHA6Q9Y2H5 1048 aa10.42□□□□□ -0.74
CLN8-207ENST00000524258 ADAM18Q9Y3Q7 739 aa10.42□□□□□ -0.74
CLN8-207ENST00000524258 RNF115Q9Y4L5 304 aa10.42□□□□□ -0.74
CLN8-207ENST00000524258 USF3Q68DE3 2245 aa10.42□□□□□ -0.74
CLN8-207ENST00000524258 IGHV1-18A0A0C4DH31 117 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 UNC119BA6NIH7 251 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 HS3ST1O14792 307 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 ATP5HO75947 161 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 TXNDC12O95881 172 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 IGHG1P01857 330 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 TP53P04637 393 aaPredicted RBP10.41□□□□□ -0.74
CLN8-207ENST00000524258 CD3EP07766 207 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 DANCRP0C864 163 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 CBR1P16152 277 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 PTAFRP25105 342 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 DAP3P51398 398 aaKnown RBP10.41□□□□□ -0.74
CLN8-207ENST00000524258 ERVK-25P63136 954 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 MYBPC1Q00872 1141 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 CHRNB3Q05901 458 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 ZNF672Q499Z4 452 aaPredicted RBP10.41□□□□□ -0.74
CLN8-207ENST00000524258 FAM98BQ52LJ0 330 aaKnown RBP10.41□□□□□ -0.74
CLN8-207ENST00000524258 MESTQ5EB52 335 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 OR2T5Q6IEZ7 315 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 KLHL24Q6TFL4 600 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 B3GLCTQ6Y288 498 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 FOXL2NBQ6ZUU3 175 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 RRM2BQ7LG56 351 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 TMEM179BQ7Z7N9 219 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 SKA3Q8IX90 412 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 CDK20Q8IZL9 346 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 ZNF611Q8N823 705 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 SYT14Q8NB59 555 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 KBTBD8Q8NFY9 601 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 OR2T29Q8NH02 315 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 NABP1Q96AH0 204 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 RSRC1Q96IZ7 334 aaKnown RBP10.41□□□□□ -0.74
CLN8-207ENST00000524258 Q96M85 177 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 FOXB1Q99853 325 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 ALG12Q9BV10 488 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 KATNB1Q9BVA0 655 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 B3GAT2Q9NPZ5 323 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 TMEM38BQ9NVV0 291 aa10.41□□□□□ -0.74
CLN8-207ENST00000524258 ZNF469Q96JG9 3925 aaPredicted RBP10.4□□□□□ -0.74
CLN8-207ENST00000524258 ARID1AO14497 2285 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 DHRS12A0PJE2 317 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 E7EQL1 145 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 TNFRSF11BO00300 401 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 ABCD4O14678 606 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 IMPA2O14732 288 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 NDUFB2O95178 105 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 SLC2A10O95528 541 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 WNT11O96014 354 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 GASTP01350 101 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 CD8AP01732 235 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 HLA-HP01893 362 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 RAF1P04049 648 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 CELA3BP08861 270 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 B4GALT1P15291 398 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 ACVR1BP36896 505 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 FMODQ06828 376 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 TSPAN31Q12999 210 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 FLOT2Q14254 428 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 PGGHGQ32M88 737 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 RFX4Q33E94 735 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 FBXW10Q5XX13 1052 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 TMEM108Q6UXF1 575 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 ZNF813Q6ZN06 617 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 MDP1Q86V88 176 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 KRTAP1-3Q8IUG1 177 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 CCDC36Q8IYA8 594 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 OR9Q2Q8NGE9 314 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 AKAP1Q92667 903 aaKnown RBP eCLIP10.4□□□□□ -0.74
CLN8-207ENST00000524258 HTRA1Q92743 480 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 SLC38A2Q96QD8 506 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 SMURF2Q9HAU4 748 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 NTN4Q9HB63 628 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 IL20RAQ9UHF4 553 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 POFUT2Q9Y2G5 429 aa10.4□□□□□ -0.74
CLN8-207ENST00000524258 MAGED1Q9Y5V3 778 aaPredicted RBP10.4□□□□□ -0.74
CLN8-207ENST00000524258 F8P00451 2351 aa10.39□□□□□ -0.75
CLN8-207ENST00000524258 SLC22A23A1A5C7 686 aa10.39□□□□□ -0.75
CLN8-207ENST00000524258 M0R1B8 84 aa10.39□□□□□ -0.75
CLN8-207ENST00000524258 OVOL3O00110 214 aa10.39□□□□□ -0.75
CLN8-207ENST00000524258 OR10H3O60404 316 aa10.39□□□□□ -0.75
CLN8-207ENST00000524258 SCG5P05408 212 aa10.39□□□□□ -0.75
CLN8-207ENST00000524258 SOD3P08294 240 aa10.39□□□□□ -0.75
CLN8-207ENST00000524258 CECR9P0C854 216 aa10.39□□□□□ -0.75
CLN8-207ENST00000524258 APEHP13798 732 aaKnown RBP10.39□□□□□ -0.75
CLN8-207ENST00000524258 ZNF14P17017 642 aaPredicted RBP10.39□□□□□ -0.75
CLN8-207ENST00000524258 PAX7P23759 505 aa10.39□□□□□ -0.75
CLN8-207ENST00000524258 CALCRP30988 508 aa10.39□□□□□ -0.75
CLN8-207ENST00000524258 CLRN1P58418 232 aa10.39□□□□□ -0.75
CLN8-207ENST00000524258 TOP3AQ13472 1001 aaPredicted RBP10.39□□□□□ -0.75
CLN8-207ENST00000524258 MICAQ29983 383 aa10.39□□□□□ -0.75
CLN8-207ENST00000524258 NRN1LQ496H8 165 aa10.39□□□□□ -0.75
CLN8-207ENST00000524258 ZNF362Q5T0B9 420 aaPredicted RBP10.39□□□□□ -0.75
CLN8-207ENST00000524258 FAM205BPQ63HN1 556 aa10.39□□□□□ -0.75
CLN8-207ENST00000524258 SMARCD3Q6STE5 483 aa10.39□□□□□ -0.75
CLN8-207ENST00000524258 KLHL17Q6TDP4 642 aa10.39□□□□□ -0.75
CLN8-207ENST00000524258 DPY19L2P2Q6ZN68 376 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms