RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 THEM4Q5T1C6 240 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 C10orf128Q5T292 105 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 RPL13AP3Q6NVV1 102 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 LRFN4Q6PJG9 635 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 SMARCD3Q6STE5 483 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 ZNF813Q6ZN06 617 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 DPY19L2P2Q6ZN68 376 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 DPPA2Q7Z7J5 298 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 MEX3DQ86XN8 651 aaKnown RBP10.97□□□□□ -0.65
VEGFA-225ENST00000523950 DEPDC4Q8N2C3 294 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 ARIH2OSQ8N7S6 290 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 ZNF611Q8N823 705 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 OR4C15Q8NGM1 316 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 ZNF519Q8TB69 540 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 CANT1Q8WVQ1 401 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 HDAC2Q92769 488 aaKnown RBP10.97□□□□□ -0.65
VEGFA-225ENST00000523950 MCHR2Q969V1 340 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 ZNF837Q96EG3 531 aaPredicted RBP10.97□□□□□ -0.65
VEGFA-225ENST00000523950 TSPAN32Q96QS1 320 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 KCNK17Q96T54 332 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 KATNB1Q9BVA0 655 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 CHID1Q9BWS9 393 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 NRIP3Q9NQ35 241 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 GRHPRQ9UBQ7 328 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 FBXL3Q9UKT7 428 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 SAMHD1Q9Y3Z3 626 aaKnown RBP10.97□□□□□ -0.65
VEGFA-225ENST00000523950 ABCA4P78363 2273 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 APCP25054 2843 aa10.97□□□□□ -0.65
VEGFA-225ENST00000523950 DCHS2Q6V1P9 2916 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 A0A096LPE4 126 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 A0A1W2PPZ6 126 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 A0A1W2PR80 420 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 XKRYO14609 159 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 ABCD4O14678 606 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 HS3ST1O14792 307 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 UBL3O95164 117 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 ATE1O95260 518 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 FARS2O95363 451 aaKnown RBP10.96□□□□□ -0.65
VEGFA-225ENST00000523950 IGKV3-15P01624 115 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 IGLV1-44P01699 117 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 CBR1P16152 277 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 NPR2P20594 1047 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 SDHAP31040 664 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 SLC6A6P31641 620 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 ARR3P36575 388 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 ACVR1BP36896 505 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 RPS6KA3P51812 740 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 RUNX1T1Q06455 604 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 CD47Q08722 323 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 KEAP1Q14145 624 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 PGBD2Q6P3X8 592 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 FAM122BQ7Z309 247 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 ADCK1Q86TW2 530 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 IGFN1Q86VF2 1251 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 PAPD5Q8NDF8 572 aaKnown RBP10.96□□□□□ -0.65
VEGFA-225ENST00000523950 FANK1Q8TC84 345 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 AKAP1Q92667 903 aaKnown RBP eCLIP10.96□□□□□ -0.65
VEGFA-225ENST00000523950 NRGNQ92686 78 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 PIGTQ969N2 578 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 FBXW5Q969U6 566 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 NMD3Q96D46 503 aaKnown RBP10.96□□□□□ -0.65
VEGFA-225ENST00000523950 ZNF570Q96NI8 536 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 SLC38A2Q96QD8 506 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 RBP7Q96R05 134 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 UBTD1Q9HAC8 227 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 TMEM38BQ9NVV0 291 aa10.96□□□□□ -0.65
VEGFA-225ENST00000523950 PRR14LQ5THK1 2151 aa10.96□□□□□ -0.66
VEGFA-225ENST00000523950 ALPK2Q86TB3 2170 aa10.96□□□□□ -0.66
VEGFA-225ENST00000523950 ITPR2Q14571 2701 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 ARRDC5A6NEK1 342 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 IMPA2O14732 288 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 TXNDC12O95881 172 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 PLAUP00749 431 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 CST1P01037 141 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 OR8G3PP0DMU2 310 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 B4GALT1P15291 398 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 ZNF26P17031 533 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-225ENST00000523950 GSTM3P21266 225 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 ERVK-25P63136 954 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 MICAQ29983 383 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 GSG1Q2KHT4 349 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 RFX4Q33E94 735 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 ZNF672Q499Z4 452 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-225ENST00000523950 ZNF770Q6IQ21 691 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-225ENST00000523950 SLC25A47Q6Q0C1 308 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 SLC22A24Q8N4F4 322 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 CLDN22Q8N7P3 220 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 SYT14Q8NB59 555 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 IL17RDQ8NFM7 739 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 KBTBD8Q8NFY9 601 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 GPA33Q99795 319 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 FOXC2Q99958 501 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 OR52D1Q9H346 318 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 LIME1Q9H400 295 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 RNPEPL1Q9HAU8 725 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 CCM2LQ9NUG4 571 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-225ENST00000523950 BEX4Q9NWD9 120 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-225ENST00000523950 PLEKHA6Q9Y2H5 1048 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 CENPEQ02224 2701 aa10.95□□□□□ -0.66
VEGFA-225ENST00000523950 IGHV1-18A0A0C4DH31 117 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms