RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 GOLGA8QA0A0J9YX86 632 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 LRP5LA4QPB2 252 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 GOLGA8OA6NCC3 632 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 NPIPB13A6NJU9 1138 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 ZNF716A6NP11 495 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 NPIPB5A8MRT5 1133 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 VGLL3A8MV65 326 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 TMEM114B3SHH9 223 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 NPIPB4C9JG80 1138 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 MCIDASD6RGH6 385 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 NPIPB9F8W1W9 429 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 GOLGA8NF8WBI6 632 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 H3BQF6 201 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 COPEO14579 308 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 GPR171O14626 319 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 LSM1O15116 133 aaKnown RBP4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 RIPK2O43353 540 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 TCF21O43680 179 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 PLIN3O60664 434 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 FCMRO60667 390 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 TBX19O60806 448 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 PEX11AO75192 247 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 BCAS1O75363 584 aaPredicted RBP4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 KRT33AO76009 404 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 SLU7O95391 586 aaKnown RBP4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 CHRNGP07510 517 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 ABHD2P08910 425 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 NEFHP12036 1026 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 ITGA2P17301 1181 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 NR4A2P43354 598 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 MAGEA8P43361 318 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 RPS6KA3P51812 740 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 DNAJB13P59910 316 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 NAA20P61599 178 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 SNRPD2P62316 118 aaKnown RBP4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 SKP2Q13309 424 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 SQLEQ14534 574 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 PTGR1Q14914 329 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 SMN1Q16637 294 aaKnown RBP4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 WHAMMP3Q1A5X7 153 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 CCDC153Q494R4 210 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 HIKESHIQ53FT3 197 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 SLC25A53Q5H9E4 307 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 CEP78Q5JTW2 689 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 OR7E24Q6IFN5 339 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 KLHL24Q6TFL4 600 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 C12orf54Q6X4T0 127 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 ZNF66Q6ZN08 573 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 TRMT10CQ7L0Y3 403 aaKnown RBP4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 EIF3MQ7L2H7 374 aaKnown RBP4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 C16orf62Q7Z3J2 963 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 C10orf107Q8IVU9 208 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 KRTCAP2Q8N6L1 136 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 WDR31Q8NA23 367 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 OR52N4Q8NGI2 321 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 PIGXQ8TBF5 258 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 BCAS4Q8TDM0 211 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 TWIST2Q8WVJ9 160 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 ST8SIA1Q92185 356 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 MTERF3Q96E29 417 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 METTL2AQ96IZ6 378 aaKnown RBP4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 ARL5BQ96KC2 179 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 FCRL1Q96LA6 429 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 C16orf45Q96MC5 204 aaPredicted RBP4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 MUS81Q96NY9 551 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 SDF2Q99470 211 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 KCNS3Q9BQ31 491 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 BPESC1Q9GZL8 116 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 LAT2Q9GZY6 243 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 SLC17A5Q9NRA2 495 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 SLC7A10Q9NS82 523 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 ACER3Q9NUN7 267 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 CHRNA9Q9UGM1 479 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 ATP6V1HQ9UI12 483 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 AMDHD2Q9Y303 409 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 TMED5Q9Y3A6 229 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 DNAJC15Q9Y5T4 150 aa4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 SPIN1Q9Y657 262 aaPredicted RBP4.55□□□□□ -1.68
CTNNA1-239ENST00000523685 SVEP1Q4LDE5 3571 aa4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 ANK2Q01484 3957 aa4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 IGKV3D-15A0A087WSY6 115 aa4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 RNF103-CHMP3A0A140T963 221 aa4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 LOC390937A0A1W2PQ73 354 aa4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 SH3PXD2BA1X283 911 aa4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 NDUFS8O00217 210 aa4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 RBMXL2O75526 392 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 STX11O75558 287 aa4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 UGT2B17O75795 530 aa4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 PMS2P2O95744 297 aa4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 AGR2O95994 175 aa4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 OR4A8P0C604 315 aa4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 OR12D1P0DN82 309 aa4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 LYL1P12980 280 aa4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 ZNF23P17027 643 aa4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 MPGP29372 298 aa4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 IL2RGP31785 369 aa4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 RPL3P39023 403 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 APOBEC1P41238 236 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 IDH2P48735 452 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-239ENST00000523685 PRPS1P60891 318 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms