RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 TGFBR2P37173 567 aa13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 AGFG1P52594 562 aaKnown RBP13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 SLC17A1Q14916 467 aa13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 ZNF169Q14929 603 aaPredicted RBP13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 SPHARQ15513 63 aa13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 TBR1Q16650 682 aa13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 TSTQ16762 297 aaKnown RBP13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 VASNQ6EMK4 673 aa13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 CREB3L2Q70SY1 520 aa13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 ACBD7Q8N6N7 88 aa13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 OR9K2Q8NGE7 335 aa13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 NEIL3Q8TAT5 605 aa13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 ISOC1Q96CN7 298 aa13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 OPALINQ96PE5 141 aa13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 CNN2Q99439 309 aaKnown RBP13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 TUBA1CQ9BQE3 449 aa13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 ALG8Q9BVK2 526 aa13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 MND1Q9BWT6 205 aa13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 ZNF71Q9NQZ8 489 aaPredicted RBP13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 COA3Q9Y2R0 106 aaPredicted RBP13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 KLHDC2Q9Y2U9 406 aa13.41□□□□□ -0.26
CSGALNACT1-211ENST00000522854 FREM1Q5H8C1 2179 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 IGLV1-36A0A0B4J1U3 117 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 TRGV5A0A0B4J1U4 118 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 DAPL1A0PJW8 107 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 EIF1BO60739 113 aaKnown RBP13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 HLA-DQA2P01906 255 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 SELENOPP49908 381 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 CXADRP78310 365 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 ZNF239Q16600 458 aaKnown RBP13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 CNPY1Q3B7I2 92 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 SOWAHCQ53LP3 525 aaPredicted RBP13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 PHYHD1Q5SRE7 291 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 PLEKHG7Q6ZR37 379 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 SLC16A12Q6ZSM3 486 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 ZIC4Q8N9L1 334 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 OR2T4Q8NH00 348 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 SPRYD4Q8WW59 207 aaPredicted RBP13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 MRPL13Q9BYD1 178 aaKnown RBP13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 FAM192AQ9GZU8 254 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 ACKR4Q9NPB9 350 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 HAO2Q9NYQ3 351 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 DKK4Q9UBT3 224 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 TP53TG5Q9Y2B4 290 aa13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 PCDHGA9Q9Y5G4 932 aaKnown RBP13.4□□□□□ -0.26
CSGALNACT1-211ENST00000522854 NPIPA2E9PIF3 369 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 NPIPA3F8WFD2 350 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 CDK2AP1O14519 115 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 AQP8O94778 261 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 PGA4P0DJD7 388 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 PGA3P0DJD8 388 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 CD36P16671 472 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 GGTLC2Q14390 218 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 SSX1Q16384 188 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 IGFL3Q6UXB1 125 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 ZNF367Q7RTV3 350 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 ZBTB46Q86UZ6 589 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 SLC35F2Q8IXU6 374 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 ZNF485Q8NCK3 441 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 C9orf43Q8TAL5 461 aaPredicted RBP13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 FNDC9Q8TBE3 224 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 DGCR14Q96DF8 476 aaKnown RBP13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 FAM122AQ96E09 287 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 YIPF6Q96EC8 236 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 COG8Q96MW5 612 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 NAA11Q9BSU3 229 aaPredicted RBP13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 MRPL22Q9NWU5 206 aaKnown RBP13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 CHCHD3Q9NX63 227 aaKnown RBP13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 RSL24D1Q9UHA3 163 aaKnown RBP13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 RASD1Q9Y272 281 aa13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 EXOSC1Q9Y3B2 195 aaKnown RBP13.4□□□□□ -0.27
CSGALNACT1-211ENST00000522854 TLN1Q9Y490 2541 aaKnown RBP13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 ZNF716A6NP11 495 aa13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 SCG5P05408 212 aa13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 EDNRAP25101 427 aa13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 PCSK6P29122 969 aa13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 WNT4P56705 351 aa13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 OR12D2P58182 307 aa13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 CLRN1P58418 232 aa13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 PLEKHN1Q494U1 663 aaPredicted RBP13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 SLC35D3Q5M8T2 416 aa13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 LCN1P1Q5VSP4 162 aa13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 LIPKQ5VXJ0 399 aa13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 DPY19L4Q7Z388 723 aa13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 TIGD4Q8IY51 512 aa13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 C12orf43Q96C57 262 aaKnown RBP13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 SLC25A44Q96H78 314 aaPredicted RBP13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 RNF167Q9H6Y7 350 aa13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 CLEC4AQ9UMR7 237 aa13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 SMG1Q96Q15 3661 aaKnown RBP13.39□□□□□ -0.27
CSGALNACT1-211ENST00000522854 ITPR1Q14643 2758 aa13.38□□□□□ -0.27
CSGALNACT1-211ENST00000522854 IRGMA1A4Y4 181 aa13.38□□□□□ -0.27
CSGALNACT1-211ENST00000522854 A6NIZ1 184 aa13.38□□□□□ -0.27
CSGALNACT1-211ENST00000522854 E9PI62 339 aa13.38□□□□□ -0.27
CSGALNACT1-211ENST00000522854 H3BMQ9 156 aa13.38□□□□□ -0.27
CSGALNACT1-211ENST00000522854 MKRN2OSH3BPM6 223 aa13.38□□□□□ -0.27
CSGALNACT1-211ENST00000522854 FAM87AP0C7U9 286 aa13.38□□□□□ -0.27
CSGALNACT1-211ENST00000522854 CDAP32320 146 aa13.38□□□□□ -0.27
CSGALNACT1-211ENST00000522854 RAP1BP61224 184 aa13.38□□□□□ -0.27
CSGALNACT1-211ENST00000522854 RPS3AP61247 264 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms