RNA–Protein interactions for RNA: ENST00000519802.5

PCM1-213, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-213ENST00000519802 CCDC50Q8IVM0 306 aa3.25□□□□□ -1.89
PCM1-213ENST00000519802 SVOPLQ8N434 492 aa3.25□□□□□ -1.89
PCM1-213ENST00000519802 VN1R2Q8NFZ6 395 aa3.25□□□□□ -1.89
PCM1-213ENST00000519802 ST8SIA1Q92185 356 aa3.25□□□□□ -1.89
PCM1-213ENST00000519802 FRAT1Q92837 279 aaPredicted RBP3.25□□□□□ -1.89
PCM1-213ENST00000519802 FGF11Q92914 225 aa3.25□□□□□ -1.89
PCM1-213ENST00000519802 SECISBP2Q96T21 854 aaKnown RBP3.25□□□□□ -1.89
PCM1-213ENST00000519802 TUBGCP2Q9BSJ2 902 aa3.25□□□□□ -1.89
PCM1-213ENST00000519802 POMKQ9H5K3 350 aa3.25□□□□□ -1.89
PCM1-213ENST00000519802 NUDT15Q9NV35 164 aa3.25□□□□□ -1.89
PCM1-213ENST00000519802 SMPD3Q9NY59 655 aaPredicted RBP3.25□□□□□ -1.89
PCM1-213ENST00000519802 DCDC2Q9UHG0 476 aa3.25□□□□□ -1.89
PCM1-213ENST00000519802 COPS3Q9UNS2 423 aa3.25□□□□□ -1.89
PCM1-213ENST00000519802 ERVW-1Q9UQF0 538 aa3.25□□□□□ -1.89
PCM1-213ENST00000519802 UGT2A1Q9Y4X1 527 aa3.25□□□□□ -1.89
PCM1-213ENST00000519802 TIMM10BQ9Y5J6 103 aa3.25□□□□□ -1.89
PCM1-213ENST00000519802 DDX49Q9Y6V7 483 aaKnown RBP3.25□□□□□ -1.89
PCM1-213ENST00000519802 PTPRBP23467 1997 aa3.25□□□□□ -1.89
PCM1-213ENST00000519802 VPS13CQ709C8 3753 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 KIAA1671Q9BY89 1806 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 SCN10AQ9Y5Y9 1956 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 C15orf38-AP3S2A0A0A6YYH1 394 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 A0A0G2JRQ6 117 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 ECI2O75521 394 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 DIRAS1O95057 198 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 OPN1MWP04001 364 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 LGALS2P05162 132 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 OPN1MW2P0DN77 364 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 OPN1MW3P0DN78 364 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 CSRP1P21291 193 aaKnown RBP3.24□□□□□ -1.89
PCM1-213ENST00000519802 CD1BP29016 333 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 SHMT2P34897 504 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 HNMTP50135 292 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 PKNOX1P55347 436 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 SELENOTP62341 195 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 SPIBQ01892 262 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 TLE4Q04727 773 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 FGL1Q08830 312 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 ARFRP1Q13795 201 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 NSUN5P1Q3KNT7 163 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 VSTM4Q8IW00 320 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 OR2L13Q8N349 312 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 OR52M1Q8NGK5 317 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 OR1E3Q8WZA6 343 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 NIPSNAP3BQ9BS92 247 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 NAT9Q9BTE0 207 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 LRRN3Q9H3W5 708 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 GORASP2Q9H8Y8 452 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 ADAM22Q9P0K1 906 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 STAP1Q9ULZ2 295 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 RABL2BQ9UNT1 228 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 TRAF3IP3Q9Y228 551 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 MUC22E2RYF6 1773 aaPredicted RBP3.24□□□□□ -1.89
PCM1-213ENST00000519802 NID2Q14112 1375 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 PRRC2AP48634 2157 aaKnown RBP3.24□□□□□ -1.89
PCM1-213ENST00000519802 CSPG4Q6UVK1 2322 aa3.24□□□□□ -1.89
PCM1-213ENST00000519802 MROH5Q6ZUA9 1318 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 ZNF208O43345 1280 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 PFKFB2O60825 505 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 ATP5LO75964 103 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 SUPT7LO94864 414 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 TDGF1P13385 188 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 ZNF44P15621 663 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 HOXB8P17481 243 aaPredicted RBP3.23□□□□□ -1.89
PCM1-213ENST00000519802 ELK1P19419 428 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 GLRA2P23416 452 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 RPL13AP40429 203 aaKnown RBP3.23□□□□□ -1.89
PCM1-213ENST00000519802 GBX2P52951 348 aaPredicted RBP3.23□□□□□ -1.89
PCM1-213ENST00000519802 APOC4P55056 127 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 BEX3Q00994 111 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 KLRC3Q07444 240 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 C1orf61Q13536 156 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 DMRTC1Q5HYR2 192 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 ZSCAN25Q6NSZ9 544 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 RGS9BPQ6ZS82 235 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 MYOCDQ8IZQ8 938 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 SLC34A3Q8N130 599 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 PIGCQ92535 297 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 TIMD4Q96H15 378 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 NPAS2Q99743 824 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 ARHGDIGQ99819 225 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 TRIM4Q9C037 500 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 RBKSQ9H477 322 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 ASB8Q9H765 288 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 ZDHHC11Q9H8X9 412 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 HOXC10Q9NYD6 342 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 KIF26AQ9ULI4 1882 aaPredicted RBP3.23□□□□□ -1.89
PCM1-213ENST00000519802 CLEC4AQ9UMR7 237 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 PRRC2CQ9Y520 2896 aaKnown RBP3.23□□□□□ -1.89
PCM1-213ENST00000519802 MYH7BA7E2Y1 1941 aa3.23□□□□□ -1.89
PCM1-213ENST00000519802 MXRA5Q9NR99 2828 aa3.22□□□□□ -1.89
PCM1-213ENST00000519802 GTF3C1Q12789 2109 aa3.22□□□□□ -1.89
PCM1-213ENST00000519802 F5P12259 2224 aa3.22□□□□□ -1.89
PCM1-213ENST00000519802 KNTC1P50748 2209 aa3.22□□□□□ -1.89
PCM1-213ENST00000519802 MED7O43513 233 aa3.22□□□□□ -1.89
PCM1-213ENST00000519802 SCGNO76038 276 aa3.22□□□□□ -1.89
PCM1-213ENST00000519802 SNAPINO95295 136 aa3.22□□□□□ -1.89
PCM1-213ENST00000519802 KLF8O95600 359 aaPredicted RBP3.22□□□□□ -1.89
PCM1-213ENST00000519802 AP2A1O95782 977 aa3.22□□□□□ -1.89
PCM1-213ENST00000519802 SNAI1O95863 264 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms