RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 SLC16A6O15403 523 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 EEF1E1O43324 174 aaKnown RBP12.51□□□□□ -0.41
SDC2-203ENST00000519587 MPZL2O60487 215 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 HIST1H1CP16403 213 aaKnown RBP12.51□□□□□ -0.41
SDC2-203ENST00000519587 BMP5P22003 454 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 EPHA2P29317 976 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 CRABP1P29762 137 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 POLR2IP36954 125 aaKnown RBP12.51□□□□□ -0.41
SDC2-203ENST00000519587 PCYT1AP49585 367 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 SLC25A35Q3KQZ1 300 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 THEM4Q5T1C6 240 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 ACSM5Q6NUN0 579 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 VWA1Q6PCB0 445 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 MRGPRGQ86SM5 289 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 C20orf196Q8IYI0 205 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 SYT14Q8NB59 555 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 SDR9C7Q8NEX9 313 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 HDAC2Q92769 488 aaKnown RBP12.51□□□□□ -0.41
SDC2-203ENST00000519587 STARD4Q96DR4 205 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 LRRC46Q96FV0 321 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 CCDC120Q96HB5 630 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 KCNK17Q96T54 332 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 ZNF184Q99676 751 aaPredicted RBP12.51□□□□□ -0.41
SDC2-203ENST00000519587 FN3KQ9H479 309 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 Q9H521 79 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 TVP23BQ9NYZ1 205 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 VSX1Q9NZR4 365 aaPredicted RBP12.51□□□□□ -0.41
SDC2-203ENST00000519587 MALT1Q9UDY8 824 aa12.51□□□□□ -0.41
SDC2-203ENST00000519587 NDRG4Q9ULP0 352 aaKnown RBP12.51□□□□□ -0.41
SDC2-203ENST00000519587 ANKRD17O75179 2603 aaKnown RBP12.51□□□□□ -0.41
SDC2-203ENST00000519587 PRR23D1E9PI22 279 aaPredicted RBP12.5□□□□□ -0.41
SDC2-203ENST00000519587 DLGAP1O14490 977 aa12.5□□□□□ -0.41
SDC2-203ENST00000519587 PRR23D2P0DMB1 279 aaPredicted RBP12.5□□□□□ -0.41
SDC2-203ENST00000519587 ZNF84P51523 738 aa12.5□□□□□ -0.41
SDC2-203ENST00000519587 SH3BGRP55822 239 aaPredicted RBP12.5□□□□□ -0.41
SDC2-203ENST00000519587 STK11Q15831 433 aa12.5□□□□□ -0.41
SDC2-203ENST00000519587 FBXW9Q5XUX1 488 aa12.5□□□□□ -0.41
SDC2-203ENST00000519587 BEND4Q6ZU67 534 aa12.5□□□□□ -0.41
SDC2-203ENST00000519587 NCCRP1Q6ZVX7 275 aaPredicted RBP12.5□□□□□ -0.41
SDC2-203ENST00000519587 PTCHD4Q6ZW05 846 aa12.5□□□□□ -0.41
SDC2-203ENST00000519587 BTLAQ7Z6A9 289 aa12.5□□□□□ -0.41
SDC2-203ENST00000519587 CCDC71Q8IV32 467 aaPredicted RBP12.5□□□□□ -0.41
SDC2-203ENST00000519587 SLC37A3Q8NCC5 494 aa12.5□□□□□ -0.41
SDC2-203ENST00000519587 OR8J1Q8NGP2 316 aa12.5□□□□□ -0.41
SDC2-203ENST00000519587 OR2T4Q8NH00 348 aa12.5□□□□□ -0.41
SDC2-203ENST00000519587 TRUB1Q8WWH5 349 aaKnown RBP12.5□□□□□ -0.41
SDC2-203ENST00000519587 TMEM54Q969K7 222 aa12.5□□□□□ -0.41
SDC2-203ENST00000519587 ALKBH3Q96Q83 286 aaPredicted RBP12.5□□□□□ -0.41
SDC2-203ENST00000519587 NMNAT3Q96T66 252 aa12.5□□□□□ -0.41
SDC2-203ENST00000519587 MRPL13Q9BYD1 178 aaKnown RBP12.5□□□□□ -0.41
SDC2-203ENST00000519587 PLSCR4Q9NRQ2 329 aa12.5□□□□□ -0.41
SDC2-203ENST00000519587 GLTPQ9NZD2 209 aa12.5□□□□□ -0.41
SDC2-203ENST00000519587 FOXD3Q9UJU5 478 aaPredicted RBP12.5□□□□□ -0.41
SDC2-203ENST00000519587 RNF6Q9Y252 685 aa12.5□□□□□ -0.41
SDC2-203ENST00000519587 ALPK2Q86TB3 2170 aa12.5□□□□□ -0.41
SDC2-203ENST00000519587 USP9YO00507 2555 aaPredicted RBP12.49□□□□□ -0.41
SDC2-203ENST00000519587 FREM1Q5H8C1 2179 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 SLC22A23A1A5C7 686 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 H7C1C5 153 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 AGAP20933 346 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 GUCA1AP43080 201 aaPredicted RBP12.49□□□□□ -0.41
SDC2-203ENST00000519587 SLC25A1P53007 311 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 LCN6P62502 163 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 ADARB1P78563 741 aaKnown RBP12.49□□□□□ -0.41
SDC2-203ENST00000519587 ADORA2A-AS1P86434 159 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 ROR2Q01974 943 aaKnown RBP12.49□□□□□ -0.41
SDC2-203ENST00000519587 TGFBR3Q03167 851 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 RUNX1T1Q06455 604 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 LGALS3BPQ08380 585 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 CRMP1Q14194 572 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 HIST3H3Q16695 136 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 TSPO2Q5TGU0 170 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 Q6ZT83 130 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 C8orf59Q8N0T1 100 aaPredicted RBP12.49□□□□□ -0.41
SDC2-203ENST00000519587 CYB561A3Q8NBI2 242 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 NPEPL1Q8NDH3 523 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 TMEM163Q8TC26 289 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 OTULINQ96BN8 352 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 SYT4Q9H2B2 425 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 RPRD1BQ9NQG5 326 aaKnown RBP12.49□□□□□ -0.41
SDC2-203ENST00000519587 SLC7A10Q9NS82 523 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 RAB26Q9ULW5 256 aa12.49□□□□□ -0.41
SDC2-203ENST00000519587 NOTCH2Q04721 2471 aa12.48□□□□□ -0.41
SDC2-203ENST00000519587 SNTNA6NMZ2 147 aa12.48□□□□□ -0.41
SDC2-203ENST00000519587 E9PQ18 207 aa12.48□□□□□ -0.41
SDC2-203ENST00000519587 KHDRBS3O75525 346 aaKnown RBP12.48□□□□□ -0.41
SDC2-203ENST00000519587 CGAP01215 116 aa12.48□□□□□ -0.41
SDC2-203ENST00000519587 IGHV3-9P01782 118 aa12.48□□□□□ -0.41
SDC2-203ENST00000519587 QDPRP09417 244 aa12.48□□□□□ -0.41
SDC2-203ENST00000519587 MPGP29372 298 aa12.48□□□□□ -0.41
SDC2-203ENST00000519587 NTF4P34130 210 aa12.48□□□□□ -0.41
SDC2-203ENST00000519587 CDKN2AP42771 156 aaKnown RBP12.48□□□□□ -0.41
SDC2-203ENST00000519587 CENPAP49450 140 aa12.48□□□□□ -0.41
SDC2-203ENST00000519587 ASCL1P50553 236 aa12.48□□□□□ -0.41
SDC2-203ENST00000519587 FAPQ12884 760 aa12.48□□□□□ -0.41
SDC2-203ENST00000519587 P2RY6Q15077 328 aa12.48□□□□□ -0.41
SDC2-203ENST00000519587 C6orf52Q5T4I8 152 aa12.48□□□□□ -0.41
SDC2-203ENST00000519587 ZNF691Q5VV52 312 aa12.48□□□□□ -0.41
SDC2-203ENST00000519587 XKRXQ6PP77 449 aa12.48□□□□□ -0.41
SDC2-203ENST00000519587 CXXC5Q7LFL8 322 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms