RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 TMEM129A0AVI4 362 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 FAM171A2A8MVW0 826 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 RNF223E7ERA6 249 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 BLOC1S5-TXNDC5H3BN57 136 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 KPNA4O00629 521 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-215ENST00000519474 NME4O00746 187 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 RNF13O43567 381 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 AKAP8O43823 692 aaKnown RBP8.11□□□□□ -1.11
HDAC3-215ENST00000519474 SSX4O60224 188 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 SERPINI2O75830 405 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 SEC14L2O76054 403 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 INMTO95050 263 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 OR5F1O95221 314 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 OR6A2O95222 327 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 ECDO95905 644 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-215ENST00000519474 CRYAAP02489 173 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 HIST1H2ABP04908 130 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 HEXAP06865 529 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 TSPAN19P0C672 248 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 UGT2B15P54855 530 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 LSM11P83369 360 aaKnown RBP eCLIP8.11□□□□□ -1.11
HDAC3-215ENST00000519474 LIPEQ05469 1076 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 PIGFQ07326 219 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 RAB35Q15286 201 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 ETFDHQ16134 617 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 KRTAP21-3Q3LHN1 58 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 DEF8Q6ZN54 512 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 HIST3H2AQ7L7L0 130 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 TSEN54Q7Z6J9 526 aaKnown RBP8.11□□□□□ -1.11
HDAC3-215ENST00000519474 MDP1Q86V88 176 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 MAPK1IP1LQ8NDC0 245 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 OR6N1Q8NGY5 312 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 PFN4Q8NHR9 129 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 FGFBP3Q8TAT2 258 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 TMEM255BQ8WV15 326 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 HTRA1Q92743 480 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 HIST1H2ACQ93077 130 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 TPD52L3Q96J77 140 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 ADAD1Q96M93 576 aaKnown RBP8.11□□□□□ -1.11
HDAC3-215ENST00000519474 AIFM2Q9BRQ8 373 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 KATNB1Q9BVA0 655 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 POLR2J2Q9GZM3 115 aaKnown RBP8.11□□□□□ -1.11
HDAC3-215ENST00000519474 POLR2J3Q9H1A7 115 aaKnown RBP8.11□□□□□ -1.11
HDAC3-215ENST00000519474 C20orf141Q9NUB4 165 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 GLTPQ9NZD2 209 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 ZNF224Q9NZL3 707 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 ZNF229Q9UJW7 825 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 POFUT2Q9Y2G5 429 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 AP3M1Q9Y2T2 418 aa8.11□□□□□ -1.11
HDAC3-215ENST00000519474 H7C417 338 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 J3KTA2 159 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 CXCR6O00574 342 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 FFAR1O14842 300 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 SNX3O60493 162 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 OR7A10O76100 309 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 BCL10O95999 233 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 F12P00748 615 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-215ENST00000519474 IGF2P01344 180 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 HLA-HP01893 362 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 F13BP05160 661 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 THRBP10828 461 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 DRD4P21917 467 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 ARR3P36575 388 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 SERPINF1P36955 418 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 RBM34P42696 430 aaKnown RBP8.1□□□□□ -1.11
HDAC3-215ENST00000519474 YAP1P46937 504 aaKnown RBP8.1□□□□□ -1.11
HDAC3-215ENST00000519474 GSK3BP49841 420 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 TAS2R41P59536 307 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 CHRNB3Q05901 458 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 KRTAP1-1Q07627 177 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 ADIPOQQ15848 244 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 HIST3H3Q16695 136 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 TMEM53Q6P2H8 277 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 HACD2Q6Y1H2 254 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 ZNF813Q6ZN06 617 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 CBLL1Q75N03 491 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 VTCN1Q7Z7D3 282 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 SKA3Q8IX90 412 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 OR4F15Q8NGB8 312 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 MOSPD2Q8NHP6 518 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 TMEM239Q8WW34 195 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 NANOS1Q8WY41 292 aaKnown RBP8.1□□□□□ -1.11
HDAC3-215ENST00000519474 SGK3Q96BR1 496 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 FBXO17Q96EF6 278 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 SGTBQ96EQ0 304 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 SLC25A44Q96H78 314 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-215ENST00000519474 DOK1Q99704 481 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 FOXB1Q99853 325 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 MRPL13Q9BYD1 178 aaKnown RBP8.1□□□□□ -1.11
HDAC3-215ENST00000519474 BARX1Q9HBU1 254 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-215ENST00000519474 NOX3Q9HBY0 568 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 B3GAT2Q9NPZ5 323 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 CA10Q9NS85 328 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 PMF1-BGLAPU3KQ54 211 aa8.1□□□□□ -1.11
HDAC3-215ENST00000519474 IGHV4-30-2A0A087WSY4 118 aa8.09□□□□□ -1.11
HDAC3-215ENST00000519474 A0A096LNT2 108 aa8.09□□□□□ -1.11
HDAC3-215ENST00000519474 IGHV2OR16-5A0A0B4J2B6 119 aa8.09□□□□□ -1.11
HDAC3-215ENST00000519474 GMNCA6NCL1 334 aa8.09□□□□□ -1.11
HDAC3-215ENST00000519474 DHHO43323 396 aa8.09□□□□□ -1.11
HDAC3-215ENST00000519474 GPRIN2O60269 458 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms