RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 WNT11O96014 354 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 CRHP06850 196 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 HKR1P10072 659 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 ZBTB25P24278 435 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 PSMB6P28072 239 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 PPICP45877 212 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 RPS10P46783 165 aaKnown RBP12.35□□□□□ -0.43
PABPC1-208ENST00000519004 KHKP50053 298 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 EFNB2P52799 333 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 ZNF280AP59817 542 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-208ENST00000519004 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.35□□□□□ -0.43
PABPC1-208ENST00000519004 NRROSQ86YC3 692 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 FRMD1Q8N878 549 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 ZNF740Q8NDX6 193 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 MAFIPQ8WZ33 124 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 GALNT14Q96FL9 552 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 EFCAB11Q9BUY7 163 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 FAM86C1Q9NVL1 165 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 GNG8Q9UK08 70 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 ANAPC1Q9H1A4 1944 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 K7ERQ8 282 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 M0QYG6 137 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 DCTN6O00399 190 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 RTCAO00442 366 aaKnown RBP12.34□□□□□ -0.43
PABPC1-208ENST00000519004 LRP3O75074 770 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 CTAG2O75638 210 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 RAB3DO95716 219 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 OR8U9P0C7N5 309 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 MYOGP15173 224 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 MAKP20794 623 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 ZNF84P51523 738 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 TBPL1P62380 186 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 ACTA2P62736 377 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 RAP1AP62834 184 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 ACTG2P63267 376 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 SSPNQ14714 243 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 RHEBQ15382 184 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 MESTQ5EB52 335 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 ZNF585AQ6P3V2 769 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 ANKRD16Q6P6B7 361 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 GKN2Q86XP6 184 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 BPIFB2Q8N4F0 458 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 OR2L5Q8NG80 312 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 OR8U1Q8NH10 309 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 OR5R1Q8NH85 324 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 GPR148Q8TDV2 347 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 PPP1R16AQ96I34 528 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 S100A13Q99584 98 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 SLC17A9Q9BYT1 436 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 POTEKPQ9BYX7 375 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 RAB33BQ9H082 229 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 OPN3Q9H1Y3 402 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-208ENST00000519004 UBQLN4Q9NRR5 601 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 SIDT1Q9NXL6 827 aaKnown RBP12.34□□□□□ -0.43
PABPC1-208ENST00000519004 KCNE3Q9Y6H6 103 aa12.34□□□□□ -0.43
PABPC1-208ENST00000519004 NUP210Q8TEM1 1887 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-208ENST00000519004 A0A087WV48 116 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 SLC5A10A0PJK1 596 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 MSGN1A6NI15 193 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 EEF1E1-BLOC1S5C9J1V9 151 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 OR1F1O43749 312 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 DCNP07585 359 aaKnown RBP12.33□□□□□ -0.43
PABPC1-208ENST00000519004 ZNF735P0CB33 412 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 C6P13671 934 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 NPPBP16860 134 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 SNRPNP63162 240 aaKnown RBP12.33□□□□□ -0.43
PABPC1-208ENST00000519004 PDZD11Q5EBL8 140 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 LYG2Q86SG7 212 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 BEND2Q8NDZ0 799 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 OR10AD1Q8NGE0 317 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 OR13C8Q8NGS7 320 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 RPS4Y2Q8TD47 263 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 MCHR1Q99705 422 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 ADAM2Q99965 735 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 ZCCHC3Q9NUD5 404 aaKnown RBP12.33□□□□□ -0.43
PABPC1-208ENST00000519004 WSB2Q9NYS7 404 aaPredicted RBP12.33□□□□□ -0.43
PABPC1-208ENST00000519004 RBPJLQ9UBG7 517 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 KCNG2Q9UJ96 466 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 SLC13A4Q9UKG4 626 aa12.33□□□□□ -0.43
PABPC1-208ENST00000519004 TRAV18A0A075B6X5 111 aa12.33□□□□□ -0.44
PABPC1-208ENST00000519004 TBC1D3BA6NDS4 549 aa12.33□□□□□ -0.44
PABPC1-208ENST00000519004 TVP23AA6NH52 213 aa12.33□□□□□ -0.44
PABPC1-208ENST00000519004 ZNF724A8MTY0 619 aa12.33□□□□□ -0.44
PABPC1-208ENST00000519004 H0YIZ8 118 aa12.33□□□□□ -0.44
PABPC1-208ENST00000519004 PLPP1O14494 284 aa12.33□□□□□ -0.44
PABPC1-208ENST00000519004 TOX3O15405 576 aaPredicted RBP12.33□□□□□ -0.44
PABPC1-208ENST00000519004 ALOX12BO75342 701 aa12.33□□□□□ -0.44
PABPC1-208ENST00000519004 PLGP00747 810 aaPredicted RBP12.33□□□□□ -0.44
PABPC1-208ENST00000519004 SERPINA5P05154 406 aa12.33□□□□□ -0.44
PABPC1-208ENST00000519004 TBC1D3HP0C7X1 549 aa12.33□□□□□ -0.44
PABPC1-208ENST00000519004 BMP7P18075 431 aa12.33□□□□□ -0.44
PABPC1-208ENST00000519004 PRSS3P35030 304 aa12.33□□□□□ -0.44
PABPC1-208ENST00000519004 RPS23P62266 143 aaKnown RBP12.33□□□□□ -0.44
PABPC1-208ENST00000519004 GRB14Q14449 540 aa12.33□□□□□ -0.44
PABPC1-208ENST00000519004 AGERQ15109 404 aa12.33□□□□□ -0.44
PABPC1-208ENST00000519004 DUSP5Q16690 384 aa12.33□□□□□ -0.44
PABPC1-208ENST00000519004 LDLRAD1Q5T700 205 aa12.33□□□□□ -0.44
PABPC1-208ENST00000519004 TBC1D3GQ6DHY5 549 aa12.33□□□□□ -0.44
PABPC1-208ENST00000519004 TMPPEQ6ZT21 453 aa12.33□□□□□ -0.44
PABPC1-208ENST00000519004 C5orf24Q7Z6I8 188 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms