RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 UGT2B10P36537 528 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 MAGEA5P43359 124 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 CD97P48960 835 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 CLRN1P58418 232 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 RPS3AP61247 264 aaKnown RBP13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 PPIAP62937 165 aaKnown RBP13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 SLC10A1Q14973 349 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 HSPB2Q16082 182 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 CDONQ4KMG0 1287 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 PLEKHG7Q6ZR37 379 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 KCTD20Q7Z5Y7 419 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 MEIOBQ8N635 442 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 ZNF511Q8NB15 262 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 NOXO1Q8NFA2 376 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 SNX33Q8WV41 574 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 PNPLA2Q96AD5 504 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 TXNDC15Q96J42 360 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 COQ7Q99807 217 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 MRPL13Q9BYD1 178 aaKnown RBP13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 CXorf56Q9H5V9 222 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 RERGLQ9H628 205 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 WDR76Q9H967 626 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 SSR3Q9UNL2 185 aa13.45□□□□□ -0.26
TRAPPC9-205ENST00000518839 A0A1W2PPW3 197 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 FAM171A2A8MVW0 826 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 ZNF814B7Z6K7 855 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 HLA-DQA2P01906 255 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 TACSTD2P09758 323 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 CTLA4P16410 223 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 NR4A1P22736 598 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 PCSK6P29122 969 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 GABRA5P31644 462 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 GBX2P52951 348 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 CLDN20P56880 219 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 TUBA1BP68363 451 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 RUNX1T1Q06455 604 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 AQP6Q13520 282 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 TRAM1Q15629 374 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 LIPKQ5VXJ0 399 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 USP43Q70EL4 1123 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 TUBA1AQ71U36 451 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 VASH1Q7L8A9 365 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 CDC20BQ86Y33 519 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 KLBQ86Z14 1044 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 OR6N2Q8NGY6 317 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 OR10D3Q8NH80 312 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 ASB17Q8WXJ9 295 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 INTS12Q96CB8 462 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 C4orf36Q96KX1 117 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 DCUN1D5Q9BTE7 237 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 KLHL9Q9P2J3 617 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 LAMP5Q9UJQ1 280 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 WASF3Q9UPY6 502 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 SSUH2Q9Y2M2 353 aa13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 PCDHGA9Q9Y5G4 932 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-205ENST00000518839 SLC35F4A4IF30 521 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 J3QLW9 94 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 SMAD9O15198 467 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 CXCL13O43927 109 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 HRGP04196 525 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 PGA4P0DJD7 388 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 PGA3P0DJD8 388 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 ZNF19P17023 458 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 GALP22466 123 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 CD79BP40259 229 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 EIF1AXP47813 144 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 SERPINB10P48595 397 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 ENTPD1P49961 510 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 LHX2P50458 406 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 VBP1P61758 197 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 EGR3Q06889 387 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 LSAMPQ13449 338 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 DOC2BQ14184 412 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 SLC17A1Q14916 467 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 SPCS2Q15005 226 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 IGFL3Q6UXB1 125 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 CREB3L2Q70SY1 520 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 FAM220AQ7Z4H9 259 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 UBQLNLQ8IYU4 475 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 ZADH2Q8N4Q0 377 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 ZNF454Q8N9F8 522 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 SYT14Q8NB59 555 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 OR9K2Q8NGE7 335 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 RPL3LQ92901 407 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 TIMP4Q99727 224 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 CHCHD6Q9BRQ6 235 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 SRXN1Q9BYN0 137 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 OR51E2Q9H255 320 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 ISG20L2Q9H9L3 353 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 DKK4Q9UBT3 224 aa13.43□□□□□ -0.26
TRAPPC9-205ENST00000518839 LOC100506127A0A0U1RQW1 187 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 TVP23AA6NH52 213 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 SULT1C4O75897 302 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 HLA-DPB1P04440 258 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 CD1AP06126 327 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 ZNF823P16415 610 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 ZNF708P17019 499 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 CELP19835 753 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 PTGS2P35354 604 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms