RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 SPRY1O43609 319 aaPredicted RBP7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 OR2T1O43869 369 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 CH25HO95992 272 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 NGFP01138 241 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 IGHV2-5P01817 119 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 ASAH2BP0C7U1 165 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 TNFRSF1BP20333 461 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 CDAP32320 146 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 CSNK1A1P48729 337 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 TMEM33P57088 247 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 SEC61A1P61619 476 aaKnown RBP7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 FMODQ06828 376 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 FADDQ13158 208 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 SCARB2Q14108 478 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 RUNDC3AQ59EK9 446 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 SPATA46Q5T0L3 261 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 FAM91A1Q658Y4 838 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 REEP3Q6NUK4 255 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 SLC35D2Q76EJ3 337 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 NET1Q7Z628 596 aaPredicted RBP7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 NKAIN4Q8IVV8 208 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 SCAIQ8N9R8 606 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 OR4K5Q8NGD3 323 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 OR6S1Q8NH40 331 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 MOSPD2Q8NHP6 518 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 DNAJA4Q8WW22 397 aaPredicted RBP7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 LRRC58Q96CX6 371 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 ZBTB18Q99592 522 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 TMEM43Q9BTV4 400 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 ZNF416Q9BWM5 594 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 ULBP2Q9BZM5 246 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 TMEM38AQ9H6F2 299 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 ZNF665Q9H7R5 613 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 TMBIM4Q9HC24 238 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 TCF7L2Q9NQB0 619 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 C20orf141Q9NUB4 165 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 KLHL21Q9UJP4 597 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 PRDM4Q9UKN5 801 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 POFUT2Q9Y2G5 429 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 WIPI2Q9Y4P8 454 aa7.02□□□□□ -1.29
SCARNA20.3-201ENST00000516913 TRPC5OSA6NMA1 111 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 CPSF4LA6NMK7 179 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 TRAPPC2LH3BP13 241 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 M0QX08 132 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 KPNA4O00629 521 aaPredicted RBP7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 DHHO43323 396 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 SHOX2O60902 331 aaPredicted RBP7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 UBOX5O94941 541 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 SNUPNO95149 360 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 SLC2A10O95528 541 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 ANP32DO95626 131 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 IGHV1-46P01743 117 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 QDPRP09417 244 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 TSPAN19P0C672 248 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 ADORA3P0DMS8 318 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 NQO1P15559 274 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 HNF1AP20823 631 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 EPHA1P21709 976 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 AHCYP23526 432 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 CRYBB2P43320 205 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 ERFP50548 548 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 ANXA11P50995 505 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 MMP15P51511 669 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 ZNF133P52736 654 aaPredicted RBP7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 UGT2B15P54855 530 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 RGS8P57771 180 aaPredicted RBP7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 MTPNP58546 118 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 MRPS11P82912 194 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 HOXA4Q00056 320 aaPredicted RBP7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 LRRC74AQ0VAA2 488 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 ZP4Q12836 540 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 TSTQ16762 297 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 TRMT5Q32P41 509 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 AWAT1Q58HT5 328 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 ENTPD8Q5MY95 495 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 C12orf54Q6X4T0 127 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 GLCCI1Q86VQ1 547 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 CCDC36Q8IYA8 594 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 SYT14Q8NB59 555 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 DEFB108BQ8NET1 73 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 SLC30A7Q8NEW0 376 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 IL17RDQ8NFM7 739 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 OR6N1Q8NGY5 312 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 OR5J2Q8NH18 312 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 OR6X1Q8NH79 312 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 PFN4Q8NHR9 129 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 FAM216AQ8WUB2 273 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 HDAC2Q92769 488 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 MCHR2Q969V1 340 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 SPDL1Q96EA4 605 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 SLC47A1Q96FL8 570 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 MARS2Q96GW9 593 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 DUX5Q96PT3 197 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 MCHR1Q99705 422 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 MS4A5Q9H3V2 200 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 NPHS2Q9NP85 383 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 HINT3Q9NQE9 182 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 CCDC167Q9P0B6 97 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 CORINQ9Y5Q5 1042 aa7.01□□□□□ -1.29
SCARNA20.3-201ENST00000516913 NOX1Q9Y5S8 564 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms