RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 CRTAPO75718 401 aaPredicted RBP11.67□□□□□ -0.54
SMAD1-215ENST00000515385 HOXB5P09067 269 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 PRKAR2AP13861 404 aaKnown RBP11.67□□□□□ -0.54
SMAD1-215ENST00000515385 PGAM2P15259 253 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 NDUFB7P17568 137 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 HOXA5P20719 270 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 ZBTB25P24278 435 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 S100A2P29034 98 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 PDX1P52945 283 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 SLC9A5Q14940 896 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 ZNF239Q16600 458 aaKnown RBP11.67□□□□□ -0.54
SMAD1-215ENST00000515385 TCEAL6Q6IPX3 200 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 SLC24A5Q71RS6 500 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 RTL10Q7L3V2 364 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 ARL14Q8N4G2 192 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 OR8S1Q8NH09 359 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 ADAMTS17Q8TE56 1095 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 CPNE2Q96FN4 548 aaPredicted RBP11.67□□□□□ -0.54
SMAD1-215ENST00000515385 SULT4A1Q9BR01 284 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 LAT2Q9GZY6 243 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 HRH4Q9H3N8 390 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 CYTL1Q9NRR1 136 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 RNF181Q9P0P0 153 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 FAM96BQ9Y3D0 163 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 TBC1D3KA0A087X1G2 549 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 TMEM72A0PK05 275 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 TBC1D3BA6NDS4 549 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 TBC1D3FA6NER0 549 aaPredicted RBP11.67□□□□□ -0.54
SMAD1-215ENST00000515385 FCMRO60667 390 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 AMY2AP04746 511 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 RHOP08100 348 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 ACKR3P25106 362 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 MAS1LP35410 378 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 NAA10P41227 235 aaPredicted RBP11.67□□□□□ -0.54
SMAD1-215ENST00000515385 MAP3K8P41279 467 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 GUCA2AQ02747 115 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 TDGQ13569 410 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 MEF2DQ14814 521 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 ELAVL1Q15717 326 aaKnown RBP11.67□□□□□ -0.54
SMAD1-215ENST00000515385 AARDQ4LEZ3 155 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 TBC1D3GQ6DHY5 549 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 WDR88Q6ZMY6 472 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 DPPA4Q7L190 304 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 ZDHHC22Q8N966 263 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 LMNTD1Q8N9Z9 388 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 OR52E2Q8NGJ4 325 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 OR5AK2Q8NH90 309 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 CDS1Q92903 461 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 NMES1Q9C002 83 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 ATXN7L1Q9ULK2 861 aaPredicted RBP11.67□□□□□ -0.54
SMAD1-215ENST00000515385 WDR45Q9Y484 360 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 TRBV5-7A0A0A0MS05 114 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 TCAPO15273 167 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 ZIC2O95409 532 aaPredicted RBP11.66□□□□□ -0.54
SMAD1-215ENST00000515385 CRHP06850 196 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 MPZP25189 248 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 GJA5P36382 358 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 CDX1P47902 265 aaPredicted RBP11.66□□□□□ -0.54
SMAD1-215ENST00000515385 CX3CR1P49238 355 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 ARHGAP11BQ3KRB8 267 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 LRRC73Q5JTD7 316 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 FAM220AQ7Z4H9 259 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 NRSN1Q8IZ57 195 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 DCUN1D4Q92564 292 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 DVL3Q92997 716 aaPredicted RBP11.66□□□□□ -0.54
SMAD1-215ENST00000515385 SLC22A18Q96BI1 424 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 SLC35A4Q96G79 324 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 KIRREL1Q96J84 757 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 PRAP1Q96NZ9 151 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 NECAB3Q96P71 396 aaPredicted RBP11.66□□□□□ -0.54
SMAD1-215ENST00000515385 MYADMQ96S97 322 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 PRRT1Q99946 306 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 ATG5Q9H1Y0 275 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 UNKLQ9H9P5 680 aaKnown RBP11.66□□□□□ -0.54
SMAD1-215ENST00000515385 SLC2A8Q9NY64 477 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 SLC25A13Q9UJS0 675 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 LSM7Q9UK45 103 aaKnown RBP11.66□□□□□ -0.54
SMAD1-215ENST00000515385 SLC27A6Q9Y2P4 619 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 CASP8AP2Q9UKL3 1982 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 PLXNA2O75051 1894 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 TRAV27A0A087WT01 109 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 FCGR3AP08637 254 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 ZNF735P0CB33 412 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 ERGP11308 486 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 LAMP2P13473 410 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 CD70P32970 193 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 RABIFP47224 123 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 NANOS3P60323 173 aaKnown RBP11.66□□□□□ -0.54
SMAD1-215ENST00000515385 MAP2K5Q13163 448 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 OR7A5Q15622 319 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 ZNF684Q5T5D7 378 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 YOD1Q5VVQ6 348 aaPredicted RBP11.66□□□□□ -0.54
SMAD1-215ENST00000515385 TMEM150AQ86TG1 271 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 TRAPPC5Q8IUR0 188 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 OR10H5Q8NGA6 315 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 OR4E2Q8NGC2 313 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 OR51A7Q8NH64 312 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 CCDC74AQ96AQ1 378 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 FBXO17Q96EF6 278 aa11.66□□□□□ -0.54
SMAD1-215ENST00000515385 CNRIP1Q96F85 164 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms