RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 HIPK4Q8NE63 616 aa12.84□□□□□ -0.35
DDR1-278ENST00000515233 SLC30A7Q8NEW0 376 aa12.84□□□□□ -0.35
DDR1-278ENST00000515233 ZNF519Q8TB69 540 aa12.84□□□□□ -0.35
DDR1-278ENST00000515233 SYNPRQ8TBG9 265 aa12.84□□□□□ -0.35
DDR1-278ENST00000515233 ZNF566Q969W8 418 aa12.84□□□□□ -0.35
DDR1-278ENST00000515233 ZMYND19Q96E35 227 aaPredicted RBP12.84□□□□□ -0.35
DDR1-278ENST00000515233 SLC25A44Q96H78 314 aaPredicted RBP12.84□□□□□ -0.35
DDR1-278ENST00000515233 MCHR1Q99705 422 aa12.84□□□□□ -0.35
DDR1-278ENST00000515233 C1orf198Q9H425 327 aa12.84□□□□□ -0.35
DDR1-278ENST00000515233 TCF7L2Q9NQB0 619 aa12.84□□□□□ -0.35
DDR1-278ENST00000515233 HINT3Q9NQE9 182 aaKnown RBP12.84□□□□□ -0.35
DDR1-278ENST00000515233 TMEM38BQ9NVV0 291 aa12.84□□□□□ -0.35
DDR1-278ENST00000515233 NKIRAS1Q9NYS0 192 aa12.84□□□□□ -0.35
DDR1-278ENST00000515233 CCDC167Q9P0B6 97 aa12.84□□□□□ -0.35
DDR1-278ENST00000515233 EVPLLA8MZ36 301 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 C11orf98E9PRG8 122 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 TRIM77I1YAP6 450 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 MGRN1O60291 552 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 FARS2O95363 451 aaKnown RBP12.83□□□□□ -0.36
DDR1-278ENST00000515233 TGDSO95455 350 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 SNAP29O95721 258 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 AVPP01185 164 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 PTHP01270 115 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 RAD52P43351 418 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 KLF3P57682 345 aaPredicted RBP12.83□□□□□ -0.36
DDR1-278ENST00000515233 PCBP3P57721 371 aaKnown RBP12.83□□□□□ -0.36
DDR1-278ENST00000515233 CCL8P80075 99 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 TEKQ02763 1124 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 ZNF74Q16587 644 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 PEG10Q86TG7 708 aaKnown RBP12.83□□□□□ -0.36
DDR1-278ENST00000515233 C11orf40Q8WZ69 217 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 JMJD8Q96S16 334 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 ARHGDIGQ99819 225 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 SH3GL3Q99963 347 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 IKZF5Q9H5V7 419 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 ZNF665Q9H7R5 613 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 SLCO1B3Q9NPD5 702 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 SLCO1C1Q9NYB5 712 aa12.83□□□□□ -0.36
DDR1-278ENST00000515233 POLR3GO15318 223 aaPredicted RBP12.82□□□□□ -0.36
DDR1-278ENST00000515233 FAM157BP0CG42 384 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 PGA4P0DJD7 388 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 PGA3P0DJD8 388 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 EGR1P18146 543 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 AQP1P29972 269 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 UCP2P55851 309 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 MAGOHP61326 146 aaKnown RBP12.82□□□□□ -0.36
DDR1-278ENST00000515233 ACTG1P63261 375 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 RBBP4Q09028 425 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 MOGQ16653 247 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 HIST3H3Q16695 136 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 DUSP7Q16829 419 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 ALKBH6Q3KRA9 238 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 TMEM154Q6P9G4 183 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 TTC33Q6PID6 262 aaPredicted RBP12.82□□□□□ -0.36
DDR1-278ENST00000515233 PAQR4Q8N4S7 273 aaPredicted RBP12.82□□□□□ -0.36
DDR1-278ENST00000515233 OR1J2Q8NGS2 313 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 SGMS2Q8NHU3 365 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 GCDHQ92947 438 aaPredicted RBP12.82□□□□□ -0.36
DDR1-278ENST00000515233 C7orf26Q96N11 449 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 TSPAN32Q96QS1 320 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 RBM4Q9BWF3 364 aaKnown RBP12.82□□□□□ -0.36
DDR1-278ENST00000515233 BCL2L14Q9BZR8 327 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 RNF121Q9H920 327 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 CDH20Q9HBT6 801 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 NANSQ9NR45 359 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 ANGPT4Q9Y264 503 aa12.82□□□□□ -0.36
DDR1-278ENST00000515233 RNF13O43567 381 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 PLPP2O43688 288 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 CDC14BO60729 498 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 DEAF1O75398 565 aaPredicted RBP12.81□□□□□ -0.36
DDR1-278ENST00000515233 ERLIN1O75477 346 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 LYPD3O95274 346 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 MPZL1O95297 269 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 CH25HO95992 272 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 THY1P04216 161 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 QDPRP09417 244 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 CCL2P13500 99 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 EPHA1P21709 976 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 LIMS1P48059 325 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 IDH3AP50213 366 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 SLC36A2Q495M3 483 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 RUNDC3AQ59EK9 446 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 ENTPD8Q5MY95 495 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 TMEM53Q6P2H8 277 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 DLEU7Q6UYE1 221 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 THSD4Q6ZMP0 1018 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 SLC16A14Q7RTX9 510 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 PTOV1Q86YD1 416 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 C3orf56Q8N813 242 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 SMYD1Q8NB12 490 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 GPR32P1Q8NGA4 272 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 OR4K5Q8NGD3 323 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 OR6T1Q8NGN1 323 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 SNX33Q8WV41 574 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 TLCD1Q96CP7 247 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 RAB39BQ96DA2 213 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 EBF4Q9BQW3 602 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 CCDC28BQ9BUN5 200 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 ZNF426Q9BUY5 554 aa12.81□□□□□ -0.36
DDR1-278ENST00000515233 TMPRSS13Q9BYE2 586 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms