RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TDRD6O60522 2096 aaKnown RBP6.71□□□□□ -1.34
CLIP1-205ENST00000514271 RAB19A4D1S5 217 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 FITM1A5D6W6 292 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 SOCS6O14544 535 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 PHOX2AO14813 284 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 EML2O95834 649 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 RAB40ALP0C0E4 278 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 ZNF10P21506 573 aaPredicted RBP6.71□□□□□ -1.34
CLIP1-205ENST00000514271 NFYAP23511 347 aaPredicted RBP6.71□□□□□ -1.34
CLIP1-205ENST00000514271 F8A1P23610 371 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 SSTR2P30874 369 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 IL18Q14116 193 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 SGCAQ16586 387 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 LIPNQ5VXI9 398 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 PAPD4Q6PIY7 484 aaKnown RBP6.71□□□□□ -1.34
CLIP1-205ENST00000514271 MED25Q71SY5 747 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 GDF7Q7Z4P5 450 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 C6orf120Q7Z4R8 191 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 CMTM4Q8IZR5 234 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 KLHL36Q8N4N3 616 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 TEX47Q8TBZ9 253 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 IP6K3Q96PC2 410 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 AIF1LQ9BQI0 150 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 OR10A4Q9H209 315 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 UBQLN3Q9H347 655 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 MRPS30Q9NP92 439 aaKnown RBP6.71□□□□□ -1.34
CLIP1-205ENST00000514271 MIEF1Q9NQG6 463 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 SLC2A8Q9NY64 477 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 ZNF107Q9UII5 783 aaPredicted RBP6.71□□□□□ -1.34
CLIP1-205ENST00000514271 SIGLEC7Q9Y286 467 aa6.71□□□□□ -1.34
CLIP1-205ENST00000514271 CDH23Q9H251 3354 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 OR52A4PA6NMU1 304 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 COLCA2A8K830 154 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 CDRT15L2A8MXV6 281 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 CIDEAO60543 219 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 CPSF4O95639 269 aaKnown RBP6.7□□□□□ -1.34
CLIP1-205ENST00000514271 FBXO45P0C2W1 286 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 JMJD7P0C870 316 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 PPP3CBP16298 524 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 TAS2R50P59544 299 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 MEF2AQ02078 507 aaPredicted RBP6.7□□□□□ -1.34
CLIP1-205ENST00000514271 CFHR1Q03591 330 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 SSBP1Q04837 148 aaKnown RBP6.7□□□□□ -1.34
CLIP1-205ENST00000514271 BIKQ13323 160 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 NKPD1Q17RQ9 610 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 SGO1Q5FBB7 561 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 FAM209BQ5JX69 171 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 LINC01590Q5TEZ4 76 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 B3GLCTQ6Y288 498 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 LDLRAD3Q86YD5 345 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 MARCH9Q86YJ5 346 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 KCNRGQ8N5I3 272 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 TRMT10AQ8TBZ6 339 aaKnown RBP6.7□□□□□ -1.34
CLIP1-205ENST00000514271 ACOT11Q8WXI4 607 aaPredicted RBP6.7□□□□□ -1.34
CLIP1-205ENST00000514271 ELP4Q96EB1 424 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 MALSU1Q96EH3 234 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 HIPK2Q9H2X6 1198 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 METTL17Q9H7H0 456 aaPredicted RBP6.7□□□□□ -1.34
CLIP1-205ENST00000514271 NXT1Q9UKK6 140 aaKnown RBP6.7□□□□□ -1.34
CLIP1-205ENST00000514271 TNFSF18Q9UNG2 199 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 GSTK1Q9Y2Q3 226 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 MUC6Q6W4X9 2439 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 CD8B2A6NJW9 211 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 BCHEP06276 602 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 NGFRP08138 427 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 CD8BP10966 210 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 PSMB1P20618 241 aaKnown RBP6.7□□□□□ -1.34
CLIP1-205ENST00000514271 MAKP20794 623 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 DNASE1P24855 282 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 S100A11P31949 105 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 VSX2P58304 361 aaPredicted RBP6.7□□□□□ -1.34
CLIP1-205ENST00000514271 ACSM2AQ08AH3 577 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 BTN1A1Q13410 526 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 GRM7Q14831 915 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 TRIQKQ629K1 86 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 ACSM2BQ68CK6 577 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 FAM198BQ6UWH4 519 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 ANGPTL5Q86XS5 388 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 TIGD4Q8IY51 512 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 OR2C3Q8N628 320 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 OR2L3Q8NG85 312 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 OR6N1Q8NGY5 312 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 OR5J2Q8NH18 312 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 OR5W2Q8NH69 310 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 NT5CQ8TCD5 201 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 MCHR2Q969V1 340 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 TXN2Q99757 166 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 TVP23BQ9NYZ1 205 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 NTNG1Q9Y2I2 539 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 LAMA2P24043 3122 aaKnown RBP6.7□□□□□ -1.34
CLIP1-205ENST00000514271 LOC390937A0A1W2PQ73 354 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 DCDC2BA2VCK2 349 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 C21orf140B9A014 251 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 ATXN7O15265 892 aaPredicted RBP6.7□□□□□ -1.34
CLIP1-205ENST00000514271 RGS5O15539 181 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 ERAL1O75616 437 aaKnown RBP6.7□□□□□ -1.34
CLIP1-205ENST00000514271 GATBO75879 557 aaKnown RBP6.7□□□□□ -1.34
CLIP1-205ENST00000514271 ATP1B1P05026 303 aa6.7□□□□□ -1.34
CLIP1-205ENST00000514271 ACAA1P09110 424 aaPredicted RBP6.7□□□□□ -1.34
CLIP1-205ENST00000514271 CALCBP10092 127 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms